The DOI matches its Crossref record; 81 of the 81 references it cites were found in a registry or an index.
The rhizosphere revisited: root microbiomics
Open accessAbstract
The rhizosphere was defined over 100 years ago as the zone around the root where microorganisms and processes important for plant growth and health are located. Recent studies show that the diversity of microorganisms associated with the root system is enormous. This rhizosphere microbiome extends the functional repertoire of the plant beyond imagination. The rhizosphere microbiome of Arabidopsis thaliana is currently being studied for the obvious reason that it allows the use of the extensive toolbox that comes with this model plant. Deciphering plant traits that drive selection and activities of the microbiome is now a major challenge in which Arabidopsis will undoubtedly be a major research object. Here we review recent microbiome studies and discuss future research directions and applicability of the generated knowledge.
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1 retracted
Badri, D. V., Chaparro, J. M., Manter, D. K., Martinoia, E., & Vivanco, J. M. (2012) · Frontiers in Plant Science · doi:10.3389/fpls.2012.00149 · Cited by 37
RetractedPhylogenetic identification and in situ detection of individual microbial cells without cultivation
Amann, R., Ludwig, W., & SCHLEIFER, K. H. (1995) · Microbiological Reviews · doi:10.1128/mmbr.59.1.143-169.1995 · Cited by 9,093
The rhizosphere microbiome and plant health
Berendsen, R. L., Pieterse, C. M. J., & Bakker, P. A. H. M. (2012) · Trends in Plant Science · doi:10.1016/j.tplants.2012.04.001 · Cited by 5,347
Self-citationMiller, M. B., & Bassler, B. L. (2001) · Annual Review of Microbiology · doi:10.1146/annurev.micro.55.1.165 · Cited by 5,105
THE ROLE OF ROOT EXUDATES IN RHIZOSPHERE INTERACTIONS WITH PLANTS AND OTHER ORGANISMS
Bais, H. P., Weir, T. L., Perry, L. G., Gilroy, S., & Vivanco, J. M. (2006) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.57.032905.105159 · Cited by 4,682
Colman (2022) · doi:10.1073/pnas · Cited by 4,370
Plant-Growth-Promoting Rhizobacteria
Lugtenberg, B., & Kamilova, F. (2009) · Annual Review of Microbiology · doi:10.1146/annurev.micro.62.081307.162918 · Cited by 3,987
Defining the core Arabidopsis thaliana root microbiome
Lundberg, D. S., Lebeis, S. L., Paredes, S. H., Yourstone, S., Gehring, J., Malfatti, S., Tremblay, J., Engelbrektson, A., Kunin, V., Rio, T. G. D., et al. (2012) · Nature · doi:10.1038/nature11237 · Cited by 2,879
Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria
Mendes, R., Kruijt, M., de Bruijn, I., Dekkers, E., van der Voort, M., Schneider, J. H. M., Piceno, Y. M., DeSantis, T. Z., Andersen, G. L., Bakker, P. A. H. M., et al. (2011) · Science · doi:10.1126/science.1203980 · Cited by 2,800
Self-citationRevealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
Bulgarelli, D., Rott, M., Schlaeppi, K., Ver Loren van Themaat, E., Ahmadinejad, N., Assenza, F., Rauf, P., Huettel, B., Reinhardt, R., Schmelzer, E., et al. (2012) · Nature · doi:10.1038/nature11336 · Cited by 2,544
Cited by
Induced systemic resistance by beneficial microbes
Pieterse, C. M. J., Zamioudis, C., Berendsen, R. L., Weller, D. M., Van Wees, S. C. M., & Bakker, P. A. H. M. (2014) · Annual Review of Phytopathology · doi:10.1146/annurev-phyto-082712-102340 · Cited by 3,272
Self-citationPlant root-microbe communication in shaping root microbiomes
Lareen, A., Burton, F., & Schäfer, P. (2016) · Plant Molecular Biology · doi:10.1007/s11103-015-0417-8 · Cited by 668
The plant microbiome explored: implications for experimental botany
Berg, G., Rybakova, D., Grube, M., & Köberl, M. (2016) · Journal of Experimental Botany · doi:10.1093/jxb/erv466 · Cited by 555
Schröder, P., Beckers, B., Daniels, S., Gnädinger, F., Maestri, E., Marmiroli, N., Mench, M., Millan, R., Obermeier, M. M., Oustriere, N., et al. (2018) · Science of The Total Environment · doi:10.1016/j.scitotenv.2017.10.209 · Cited by 151
Root and shoot response to nickel in hyperaccumulator and non-hyperaccumulator species
Rosatto, S., Mariotti, M., Romeo, S., & Roccotiello, E. (2021) · Plants · doi:10.3390/plants10030508 · Cited by 28
Metadata
- Authors
- Bakker, P. A. H. M., Berendsen, R. L., Doornbos, R. F., Wintermans, P. C. A., & Pieterse, C. M. J.
- Venue
- Frontiers in Plant Science
- Publisher
- Frontiers Media SA
- Published
- 2013
- Volume
- 4
- Pages
- 165-165
- ISSN
- 1664-462X (ISSN-L)
- OpenAlex
- W2111331074
- Cited by
- 490
- References
- 81
- FWCI
- 27.30
- Type
- journal article
- Language
- en
- Open access
- gold
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- Bakker, P. A. H. M., Berendsen, R. L., Doornbos, R. F., Wintermans, P. C. A., & Pieterse, C. M. J. (2013). The rhizosphere revisited: root microbiomics. Frontiers in Plant Science. https://doi.org/10.3389/fpls.2013.00165
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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