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Phased T2T 1KGP panel
Open accessAbstract
Uploaded repository of phased T2T 1000 genomes reference panel. More information at https://github.com/JosephLalli/phasing_T2T.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Citations
Cited by
Sorted by citations
Liang, S.-A., Ren, T., Zhang, J., He, J., Wang, X., Jiang, X., He, Y., McCoy, R. C., Fu, Q., Akey, J. M., et al. (2025) · Genome Biology · doi:10.1186/s13059-025-03502-z · Cited by 8
Metadata
- Authors
- Lalli, J.
- Affiliations
- University of Wisconsin–Madison (US)
- Corresponding author
- Lalli, Joseph
- ORCID
- Lalli, Joseph
- Venue
- Zenodo
- Publisher
- Zenodo
- Published
- 2023-02-16
- OpenAlex
- W4393566028
- Cited by
- 3
- References
- 0
- Citations by year
- 2025: 3
- Type
- dataset
- Language
- en
- Open access
- green
- zenodo.org
- Licence
- Locations
- Zenodo (CERN European Organization for Nuclear Research) (submittedVersion, cc-by)
- Zenodo (CERN European Organization for Nuclear Research) (cc-by)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Forensic and Genetic Research
- Keywords
- haplotype phasing, genotype imputation, haplotype reference panel, T2T-CHM13, human pangenome, 1000 Genomes Project, recombination maps, human genome assembly
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Phased T2T 1KGP panel. https://app.cochat.ai/papers/10.5281/zenodo.7612953
- The paper
- Lalli, J. (2023). Phased T2T 1KGP panel. Zenodo. https://doi.org/10.5281/zenodo.7612953