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One-by-One Sample Preparation Method for Protein Network Analysis

Iemura, Shun-Ichiro, Natsume, Tohru·2012·Protein Interactions
DOI 10.5772/37931
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  • The fully automated robotic IP and protein identification system is highly sensitive and reproducible.

    “Given these advantages, plus our fully automated robotic IP and protein identification system, which is highly sensitive and reproducible (11), we opted to use the in vitro purification approach, combined with comparison analysis.”

    From ZFP36L1 and ZFP36L2 control LDLR mRNA stability via the ERK–RSK pathway (2014) · cites this paper as [11]

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Research works printed but not linked: 23

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  6. Domon, B. & Aebersold, R. (2006). Mass spectrometry and protein analysis. Science, 312 (5771), 212-217.
  7. Einhauer, A. & Jungbauer, A. (2001). The FLAG peptide, a versatile fusion tag for the purification of recombinant proteins. J. Biochem. Biophys. Methods, 49 (1-3), 455-465.
  8. Gavin, A. C., Bosche, M., Krause, R., Grandi, P., Marzioch, M., Bauer, A., Schultz, J., Rick, J. M., Michon, A. M., Cruciat, C. M., Remor, M., Hofert, C., Schelder, M., Brajenovic, M., Ruffner, H., Merino, A., Klein, K., Hudak, M., Dickson, D., Rudi, T., Gnau, V., Bauch, A., Bastuck, S., Huhse, B., Leutwein, C., Heurtier, M. A., Copley, R. R., Edelmann, A., Querfurth, E., Rybin, V., Drewes, G., Raida, M., Bouwmeester, T., Bork, P., Seraphin, B., Kuster, B., Neubauer, G. & Superti-Furga, G. (2002). Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature, 415 (6868), 141-147.
  9. Hirano, Y., Hendil, K. B., Yashiroda, H., Iemura, S., Nagane, R., Hioki, Y., Natsume, T., Tanaka, K. & Murata, S. (2005). A heterodimeric complex that promotes the assembly of mammalian 20S proteasomes. Nature, 437 (7063), 1381-1385.
  10. Ho, Y., Gruhler, A., Heilbut, A., Bader, G. D., Moore, L., Adams, S. L., Millar, A., Taylor, P., Bennett, K., Boutilier, K., Yang, L., Wolting, C., Donaldson, I., Schandorff, S., Shewnarane, J., Vo, M., Taggart, J., Goudreault, M., Muskat, B., Alfarano, C., Dewar, D., Lin, Z., Michalickova, K., Willems, A. R., Sassi, H., Nielsen, P. A., Rasmussen, K. J., Andersen, J. R., Johansen, L. E., Hansen, L. H., Jespersen, H., Podtelejnikov, A., Nielsen, E., Crawford, J., Poulsen, V., Sorensen, B. D., Matthiesen, J., Hendrickson, R. C., Gleeson, F., Pawson, T., Moran, M. F., Durocher, D., Mann, M., Hogue, C. W., Figeys, D. & Tyers, M. (2002). Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature, 415 (6868), 180-183.
  11. Huang, H. & He, X. (2008). Wnt/beta-catenin signaling: new (and old) players and new insights. Curr. Opin. Cell Biol., 20 (2), 119-125.
  12. Huang, S. M., Mishina, Y. M., Liu, S., Cheung, A., Stegmeier, F., Michaud, G. A., Charlat, O., Wiellette, E., Zhang, Y., Wiessner, S., Hild, M., Shi, X., Wilson, C. J., Mickanin, C., Myer, V., Fazal, A., Tomlinson, R., Serluca, F., Shao, W., Cheng, H., Shultz, M., Rau, C., Schirle, M., Schlegl, J., Ghidelli, S., Fawell, S., Lu, C., Curtis, D., Kirschner, M. W., Lengauer, C., Finan, P. M., Tallarico, J. A., Bouwmeester, T., Porter, J. A., Bauer, A. & Cong, F. (2009). Tankyrase inhibition stabilizes axin and antagonizes Wnt signalling. Nature, 461 (7264), 614-620.
  13. Iioka, H., Iemura, S., Natsume, T. & Kinoshita, N. (2007). Wnt signalling regulates paxillin ubiquitination essential for mesodermal cell motility. Nat. Cell Biol., 9 (7), 813-821.
  14. Kaneko, T., Hamazaki, J., Iemura, S., Sasaki, K., Furuyama, K., Natsume, T., Tanaka, K. & Murata, S. (2009). Assembly pathway of the Mammalian proteasome base subcomplex is mediated by multiple specific chaperones. Cell, 137 (5), 914-925.
  15. Kitajima, T. S., Sakuno, T., Ishiguro, K., Iemura, S., Natsume, T., Kawashima, S. A. & Watanabe, Y. (2006). Shugoshin collaborates with protein phosphatase 2A to protect cohesin. Nature, 441 (7089), 46-52.
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  20. Nishiyama, M., Oshikawa, K., Tsukada, Y., Nakagawa, T., Iemura, S., Natsume, T., Fan, Y., Kikuchi, A., Skoultchi, A. I. & Nakayama, K. I. (2009). CHD8 suppresses p53- mediated apoptosis through histone H1 recruitment during early embryogenesis. Nat. Cell Biol., 11 (2), 172-182.
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Metadata

Authors
Iemura, S.-I., & Natsume, T.
Venue
Protein Interactions
Publisher
InTech
Published
2012-03-16
DOI
10.5772/37931
Cited by
2
References
1
Language
en

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