Cited by 2Photosynthetic Processes and MechanismsEnzyme Structure and FunctionProtein Structure and Dynamics

Structure of the Calvin-Benson-Bassham sedoheptulose-1,7-bisphosphatase from the model microalga Chlamydomonas reinhardtii

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Le Moigne, Théo, Santoni, Martina, Jomat, Lucile, Lemaire, Stéphane D, Zaffagnini, Mirko, Chéron, Nicolas, Henri, Julien·2025·eLife

Published version of a preprint

Abstract

The Calvin-Benson-Bassham cycle (CBBC) performs carbon fixation in photosynthetic organisms. Among the eleven enzymes that participate in the pathway, sedoheptulose-1,7-bisphosphatase (SBPase) is expressed in photo-autotrophs and catalyzes the hydrolysis of sedoheptulose-1,7-bisphosphate (SBP) to sedoheptulose-7-phosphate (S7P). SBPase, along with nine other enzymes in the CBBC, contributes to the regeneration of ribulose-1,5-bisphosphate, the carbon-fixing co-substrate used by ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco). The metabolic role of SBPase is restricted to the CBBC, and a recent study revealed that the three-dimensional structure of SBPase from the moss Physcomitrium patens was found to be similar to that of fructose-1,6-bisphosphatase (FBPase), an enzyme involved in both CBBC and neoglucogenesis. In this study we report the first structure of an SBPase from a chlorophyte, the model unicellular green microalga Chlamydomonas reinhardtii . By combining experimental and computational structural analyses, we describe the topology, conformations, and quaternary structure of Chlamydomonas reinhardtii SBPase ( Cr SBPase). We identify active site residues and locate sites of redox- and phospho-post-translational modifications that contribute to enzymatic functions. Finally, we observe that Cr SBPase adopts distinct oligomeric states that may dynamically contribute to the control of its activity.

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Authors
Le Moigne, T., Santoni, M., Jomat, L., Lemaire, S. D., Zaffagnini, M., Chéron, N., & Henri, J.
Affiliations
  • Sorbonne Université, CNRS, Laboratoire de Biologie Computationnelle et Quantitative UMR 7238, Institut de Biologie Paris-Seine
  • Centre National de la Recherche Scientifique (FR)
  • University of Bologna (IT)
Corresponding author
Henri, Julien
Venue
eLife
Published
2025-04-01
Volume
12
ISSN
2050-084X (ISSN-L)
OpenAlex
W4380358443
Cited by
2
References
3
Citations by year
2025: 2
Type
posted content
Language
en
Open access
Locations
  • eLife (publishedVersion, cc-by)
  • Europe PMC (PubMed Central) (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • HAL (submittedVersion, cc-by)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Funders
  • Centre National de la Recherche Scientifique (INSB-D-2022-135)
  • GENCI-IDRIS (2021-077156)
  • Agence Nationale de la Recherche (ANR-19-CE11-0009)
  • University of Bologna (ERASMUS+)
  • Sorbonne University (ERASMUS+)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Photosynthetic Processes and Mechanisms
  • Physical Sciences › Materials Science › Materials Chemistry › Enzyme Structure and Function
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
Keywords
sedoheptulose-1,7-bisphosphatase, Calvin cycle, Chlamydomonas reinhardtii, enzyme crystal structure, quaternary structure, oligomeric state, active site residues, ribulose-1,5-bisphosphate regeneration, CO2 fixation
MeSH terms
Models, Molecular, Phosphoric Monoester Hydrolases, Photosynthesis, Protein Conformation, Chlamydomonas reinhardtii, Crystallography, X-Ray

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