Gao, Mu

AF2Complex predicts direct physical interactions in multimeric proteins with deep learning

Gao, M., Nakajima An, D., Parks, J. M., & Skolnick, J. (2022) · Nature Communications

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 252

AlphaFold 2: Why It Works and Its Implications for Understanding the Relationships of Protein Sequence, Structure, and Function

Skolnick, J., Gao, M., Zhou, H., & Singh, S. (2021) · Journal of Chemical Information and Modeling

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 251

Structural space of protein–protein interfaces is degenerate, close to complete, and highly connected

Gao, M., & Skolnick, J. (2010) · Proceedings of the National Academy of Sciences

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 139

Comprehensive prediction of drug-protein interactions and side effects for the human proteome

Zhou, H., Gao, M., & Skolnick, J. (2015) · Scientific Reports

Computational Drug Discovery MethodsBioinformatics and Genomic Networks

Cited by 138

Insights into disease-associated mutations in the human proteome through protein structural analysis

Gao, M., Zhou, H., & Skolnick, J. (2015) · Structure

Genomics and Rare DiseasesProtein Structure and Dynamics

Cited by 113

iAlign: a method for the structural comparison of protein–protein interfaces

Gao, M., & Skolnick, J. (2010) · Bioinformatics

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 98

DESTINI: A deep-learning approach to contact-driven protein structure prediction

Gao, M., Zhou, H., & Skolnick, J. (2019) · Scientific Reports

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 61

On the possible origin of protein homochirality, structure, and biochemical function

Skolnick, J., Zhou, H., & Gao, M. (2019) · Proceedings of the National Academy of Sciences

Origins and Evolution of LifeRNA and protein synthesis mechanisms

Cited by 45

New benchmark metrics for protein‐protein docking methods

Gao, M., & Skolnick, J. (2011) · Proteins: Structure, Function, and Bioinformatics

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 42

The role of local versus nonlocal physicochemical restraints in determining protein native structure

Skolnick, J., & Gao, M. (2021) · Current Opinion in Structural Biology

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 21

A novel sequence alignment algorithm based on deep learning of the protein folding code

Gao, M., & Skolnick, J. (2021) · Bioinformatics

Protein Structure and DynamicsGenomics and Phylogenetic Studies

Cited by 18