Lieb, Jason D.

The accessible chromatin landscape of the human genome

Thurman, R. E., Rynes, E., Humbert, R., Vierstra, J., Maurano, M. T., Haugen, E., Sheffield, N. C., Stergachis, A. B., Wang, H., Vernot, B., et al. (2012) · Nature

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

Cited by 2,679

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Landt, S. G., Marinov, G. K., Kundaje, A., Kheradpour, P., Pauli, F., Batzoglou, S., Bernstein, B. E., Bickel, P., Brown, J. B., Cayting, P., et al. (2012) · Genome Research

Genomics and Chromatin DynamicsGenomics and Phylogenetic Studies

Cited by 2,033

Evidence for nucleosome depletion at active regulatory regions genome-wide

Lee, C.-K., Shibata, Y., Rao, B., Strahl, B. D., & Lieb, J. D. (2004) · Nature Genetics

Genomics and Chromatin DynamicsNuclear Structure and Function

Cited by 738

Comparative analysis of metazoan chromatin organization

Ho, J. W. K., Jung, Y. L., Liu, T., Alver, B. H., Lee, S., Ikegami, K., Sohn, K.-A., Minoda, A., Tolstorukov, M. Y., Appert, A., et al. (2014) · Nature

Genomics and Chromatin DynamicsEpigenetics and DNA Methylation

Cited by 390

Integrating regulatory motif discovery and genome-wide expression analysis

Conlon, E. M., Liu, X. S., Lieb, J. D., & Liu, J. S. (2003) · Proceedings of the National Academy of Sciences

Genomics and Chromatin DynamicsFungal and yeast genetics research

Cited by 343

Heritable Individual-Specific and Allele-Specific Chromatin Signatures in Humans

McDaniell, R., Lee, B.-K., Song, L., Liu, Z., Boyle, A. P., Erdos, M. R., Scott, L. J., Morken, M. A., Kucera, K. S., Battenhouse, A., et al. (2010) · Science

Genomics and Chromatin DynamicsGenetic Associations and Epidemiology

Cited by 308

Genome-wide protein–DNA binding dynamics suggest a molecular clutch for transcription factor function

Lickwar, C. R., Mueller, F., Hanlon, S. E., McNally, J. G., & Lieb, J. D. (2012) · Nature

Genomics and Chromatin DynamicsDiffusion and Search Dynamics

Cited by 241

Zelda is differentially required for chromatin accessibility, transcription factor binding, and gene expression in the early Drosophila embryo

Schulz, K. N., Bondra, E. R., Moshe, A., Villalta, J. E., Lieb, J. D., Kaplan, T., McKay, D. J., & Harrison, M. M. (2015) · Genome Research

Genomics and Chromatin DynamicsDevelopmental Biology and Gene Regulation

Cited by 177

Cell Cycle–Specified Fluctuation of Nucleosome Occupancy at Gene Promoters

Hogan, G. J., Lee, C.-K., & Lieb, J. D. (2006) · PLoS Genetics

Genomics and Chromatin DynamicsFungal and yeast genetics research

Cited by 109

STAT3 acts through pre-existing nucleosome-depleted regions bound by FOS during an epigenetic switch linking inflammation to cancer

Fleming, J. D., Giresi, P. G., Lindahl-Allen, M., Krall, E. B., Lieb, J. D., & Struhl, K. (2015) · Epigenetics & Chromatin

Cytokine Signaling Pathways and InteractionsGenomics and Chromatin Dynamics

Cited by 39