Langmead, Ben

Fast gapped-read alignment with Bowtie 2

Langmead, B., & Salzberg, S. L. (2012) · Nature Methods

Genomics and Phylogenetic StudiesAlgorithms and Data Compression

Cited by 56,400

HISAT: a fast spliced aligner with low memory requirements

Kim, D., Langmead, B., & Salzberg, S. L. (2015) · Nature Methods

Genomics and Phylogenetic StudiesAlgorithms and Data Compression

Cited by 24,112

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Langmead, B., Trapnell, C., Pop, M., & Salzberg, S. L. (2009) · Genome Biology

Genomics and Phylogenetic StudiesAlgorithms and Data Compression

Cited by 21,849

Polyester : simulating RNA-seq datasets with differential transcript expression

Frazee, A. C., Jaffe, A. E., Langmead, B., & Leek, J. T. (2015) · Bioinformatics

Genomics and Phylogenetic StudiesGene expression and cancer classification

Cited by 313

Cloud computing for genomic data analysis and collaboration

Langmead, B., & Nellore, A. (2018) · Nature Reviews Genetics

Cloud Computing and Resource ManagementScientific Computing and Data Management

Cited by 310

ASCOT identifies key regulators of neuronal subtype-specific splicing

Ling, J. P., Wilks, C., Charles, R., Leavey, P. J., Ghosh, D., Jiang, L., Santiago, C. P., Pang, B., Venkataraman, A., Clark, B. S., et al. (2020) · Nature Communications

RNA Research and SplicingRNA regulation and disease

Cited by 107

Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn

Liebhoff, A.-M., Venkataraman, T., Morgenlander, W. R., Na, M., Kula, T., Waugh, K., Morrison, C., Rewers, M., Longman, R., Round, J., et al. (2024) · Nature Communications

vaccines and immunoinformatics approachesBacteriophages and microbial interactions

Cited by 10

Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn

Liebhoff, A.-M., Venkataraman, T., Morgenlander, W. R., Na, M., Kula, T., Waugh, K., Morrison, C., Rewers, M., Longman, R., Round, J., et al. (2023) · Nature Communications

vaccines and immunoinformatics approachesBacteriophages and microbial interactions

Cited by 10