Bhattacharya, Nicholas

Evaluating Protein Transfer Learning with TAPE

Rao, R., Bhattacharya, N., Thomas, N., Duan, Y., Chen, X., Canny, J., Abbeel, P., & Song, Y. S. (2019) · bioRxiv (Cold Spring Harbor Laboratory)

Machine Learning in BioinformaticsProtein Structure and Dynamics

Cited by 719

End-to-end learning of multiple sequence alignments with differentiable Smith–Waterman

Petti, S., Bhattacharya, N., Rao, R., Dauparas, J., Thomas, N., Zhou, J., Rush, A. M., Koo, P., & Ovchinnikov, S. (2023) · Bioinformatics

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 54

Interpreting Potts and Transformer Protein Models Through the Lens of Simplified Attention

Bhattacharya, N., Thomas, N., Rao, R., Dauparas, J., Koo, P. K., Baker, D., Song, Y. S., & Ovchinnikov, S. (2021) · Biocomputing 2022

Machine Learning in BioinformaticsProtein Structure and Dynamics

Cited by 20