Pond, Sergei L. Kosakovsky

HyPhy: hypothesis testing using phylogenies

Pond, S. L. K., Frost, S. D. W., & Muse, S. V. (2005) · Bioinformatics

Genomics and Phylogenetic StudiesEvolution and Genetic Dynamics

Cited by 2,866

Emergence and rapid spread of a new severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) lineage with multiple spike mutations in South Africa

Tegally, H., Wilkinson, E., Giovanetti, M., Iranzadeh, A., Fonseca, V., Giandhari, J., Doolabh, D., Pillay, S., San, E. J., Msomi, N., et al. (2020) · Nature

SARS-CoV-2 and COVID-19 ResearchCOVID-19 epidemiological studies

Cited by 2,535

Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil

Faria, N. R., Mellan, T. A., Whittaker, C., Claro, I. M., Candido, D. D. S., Mishra, S., Crispim, M. A. E., Sales, F. C. S., Hawryluk, I., McCrone, J. T., et al. (2021) · Science

SARS-CoV-2 and COVID-19 ResearchCOVID-19 epidemiological studies

Cited by 1,461

Recent Zoonotic Spillover and Tropism Shift of a Canine Coronavirus Is Associated with Relaxed Selection and Putative Loss of Function in NTD Subdomain of Spike Protein

Zehr, J. D., Pond, S. L. K., Martin, D. P., Ceres, K., Whittaker, G. R., Millet, J. K., Goodman, L. B., & Stanhope, M. J. (2022) · Viruses

Animal Virus Infections StudiesSARS-CoV-2 and COVID-19 Research

Cited by 23