Büttner, Maren

Benchmarking atlas-level data integration in single-cell genomics

Luecken, M. D., Büttner, M., Chaichoompu, K., Danese, A., Interlandi, M., Mueller, M. F., Strobl, D. C., Zappia, L., Dugas, M., Colomé-Tatché, M., et al. (2022) · Nature Methods

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 1,438

Diffusion pseudotime robustly reconstructs lineage branching

Haghverdi, L., Büttner, M., Wolf, F. A., Buettner, F., & Theis, F. J. (2016) · Nature Methods

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 1,385

Best practices for single-cell analysis across modalities

Heumos, L., Schaar, A. C., Lance, C., Litinetskaya, A., Drost, F., Zappia, L., Lücken, M. D., Strobl, D. C., Henao, J., Curion, F., et al. (2023) · Nature Reviews Genetics

Single-cell and spatial transcriptomicsBioinformatics and Genomic Networks

Cited by 1,051

destiny : diffusion maps for large-scale single-cell data in R

Angerer, P., Haghverdi, L., Büttner, M., Theis, F. J., Marr, C., & Buettner, F. (2016) · Bioinformatics

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 640

Mapping single-cell data to reference atlases by transfer learning

Lotfollahi, M., Naghipourfar, M., Luecken, M. D., Khajavi, M., Büttner, M., Wagenstetter, M., Avsec, Ž., Gayoso, A., Yosef, N., Interlandi, M., et al. (2022) · Nature Biotechnology

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 602

A test metric for assessing single-cell RNA-seq batch correction

Büttner, M., Miao, Z., Wolf, F. A., Teichmann, S. A., & Theis, F. J. (2019) · Nature Methods

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 511

scCODA is a Bayesian model for compositional single-cell data analysis

Büttner, M., Ostner, J., Müller, C. L., Theis, F. J., & Schubert, B. (2021) · Nature Communications

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 388