Mukherjee, Sayan

Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

Subramanian, A., Tamayo, P., Mootha, V. K., Mukherjee, S., Ebert, B. L., Gillette, M. A., Paulovich, A., Pomeroy, S. L., Golub, T. R., Lander, E. S., et al. (2005) · Proceedings of the National Academy of Sciences

Bioinformatics and Genomic NetworksGene expression and cancer classification

Cited by 53,625

An oncogenic KRAS2 expression signature identified by cross-species gene-expression analysis.

Sweet-Cordero, A., Mukherjee, S., Subramanian, A., You, H., Roix, J. J., Ladd-Acosta, C., Mesirov, J., Golub, T. R., & Jacks, T. (2005) · Nature Genetics

Protein Kinase Regulation and GTPase SignalingCancer Genomics and Diagnostics

Cited by 414

Probability measures on the space of persistence diagrams

Mileyko, Y., Mukherjee, S., & Harer, J. (2011) · Inverse Problems

Topological and Geometric Data AnalysisGeometric Analysis and Curvature Flows

Cited by 249

Gene expression changes and molecular pathways mediating activity-dependent plasticity in visual cortex

Tropea, D., Kreiman, G., Lyckman, A., Mukherjee, S., Yu, H., Horng, S., & Sur, M. (2006) · Nature Neuroscience

Visual perception and processing mechanismsNeurogenesis and neuroplasticity mechanisms

Cited by 226

Fréchet Means for Distributions of Persistence Diagrams

Turner, K., Mileyko, Y., Mukherjee, S., & Harer, J. (2014) · Discrete & Computational Geometry

Topological and Geometric Data AnalysisGeometric Analysis and Curvature Flows

Cited by 207

Integrating genetic and gene expression evidence into genome-wide association analysis of gene sets

Xiong, Q., Ancona, N., Hauser, E. R., Mukherjee, S., & Furey, T. S. (2012) · Genome Research

Bioinformatics and Genomic NetworksGenetic Associations and Epidemiology

Cited by 103