Parks, Benjamin

Single-cell multiomic analysis identifies regulatory programs in mixed-phenotype acute leukemia

Granja, J. M., Klemm, S., McGinnis, L. M., Kathiria, A. S., Mezger, A., Corces, M. R., Parks, B., Gars, E., Liedtke, M., Zheng, G. X. Y., et al. (2019) · Nature Biotechnology

Single-cell and spatial transcriptomicsGenomics and Chromatin Dynamics

Cited by 498

NEAT-seq: simultaneous profiling of intra-nuclear proteins, chromatin accessibility and gene expression in single cells

Chen, A. F., Parks, B., Kathiria, A. S., Ober-Reynolds, B., Goronzy, J. J., & Greenleaf, W. J. (2022) · Nature Methods

Single-cell and spatial transcriptomicsGenomics and Chromatin Dynamics

Cited by 139

Single-molecule states link transcription factor binding to gene expression

Doughty, B. R., Hinks, M. M., Schaepe, J. M., Marinov, G. K., Thurm, A. R., Rios-Martinez, C., Parks, B. E., Tan, Y., Marklund, E., Dubocanin, D., et al. (2024) · Nature

Genomics and Chromatin DynamicsGene Regulatory Network Analysis

Cited by 42

PU.1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape

Gamble, N., Bradu, A., Caldwell, J. A., McKeever, J., Bolonduro, O., Ermis, E., Kaiser, C., Kim, Y., Parks, B., Klemm, S., et al. (2024) · Nature Immunology

Genomics and Chromatin DynamicsT-cell and B-cell Immunology

Cited by 26