Svensson, Valentine

The Technology and Biology of Single-Cell RNA Sequencing

Kolodziejczyk, A. A., Kim, J. K., Svensson, V., Marioni, J. C., & Teichmann, S. A. (2015) · Molecular Cell

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 1,487

A Python library for probabilistic analysis of single-cell omics data

Gayoso, A., Lopez, R., Xing, G., Boyeau, P., Valiollah Pour Amiri, V., Hong, J., Wu, K., Jayasuriya, M., Mehlman, E., Langevin, M., et al. (2022) · Nature Biotechnology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 789

SpatialDE: identification of spatially variable genes

Svensson, V., Teichmann, S. A., & Stegle, O. (2018) · Nature Methods

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 695

Power analysis of single-cell RNA-sequencing experiments

Svensson, V., Natarajan, K. N., Ly, L.-H., Miragaia, R. J., Labalette, C., Macaulay, I. C., Cvejic, A., & Teichmann, S. A. (2017) · Nature Methods

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 568

A multimodal cell census and atlas of the mammalian primary motor cortex

BRAIN Initiative Cell Census Network (BICCN), BRAIN Initiative Cell Census Network (BICCN) Corresponding authors, Callaway, E. M., Dong, H.-W., Ecker, J. R., Hawrylycz, M. J., Huang, Z. J., Lein, E. S., Ngai, J., Osten, P., et al. (2021) · Nature

Single-cell and spatial transcriptomicsGenomics and Chromatin Dynamics

Cited by 522

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex

Yao, Z., Liu, H., Xie, F., Fischer, S., Adkins, R. S., Aldridge, A. I., Ament, S. A., Bartlett, A., Behrens, M. M., Van den Berge, K., et al. (2021) · Nature

Single-cell and spatial transcriptomicsGenomics and Chromatin Dynamics

Cited by 398

An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

Yao, Z., Liu, H., Xie, F., Fischer, S., Booeshaghi, A. S., Adkins, R. S., Aldridge, A. I., Ament, S. A., Pinto-Duarte, A., Bartlett, A., et al. (2020) · Nature

Single-cell and spatial transcriptomicsGenomics and Chromatin Dynamics

Cited by 397

Droplet scRNA-seq is not zero-inflated

Svensson, V. (2019) · Nature Biotechnology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 356

A curated database reveals trends in single-cell transcriptomics

Svensson, V., da Veiga Beltrame, E., & Pachter, L. (2020) · Database

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 223

Single-Cell RNA-Sequencing Reveals a Continuous Spectrum of Differentiation in Hematopoietic Cells

Macaulay, I. C., Svensson, V., Labalette, C., Ferreira, L., Hamey, F., Voet, T., Teichmann, S. A., & Cvejic, A. (2016) · Cell Reports

Single-cell and spatial transcriptomicsDevelopmental Biology and Gene Regulation

Cited by 191

Computational approaches for interpreting sc RNA‐seq data

Rostom, R., Svensson, V., Teichmann, S. A., & Kar, G. (2017) · FEBS Letters

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 107