Mukhopadhyay, Aindrila

Functional Genomic Study of Exogenous n -Butanol Stress in Escherichia coli

Rutherford, B. J., Dahl, R. H., Price, R. E., Szmidt, H. L., Benke, P. I., Mukhopadhyay, A., & Keasling, J. D. (2010) · Applied and Environmental Microbiology

Microbial Metabolic Engineering and BioproductionBacterial Genetics and Biotechnology

Cited by 227

Importance of systems biology in engineering microbes for biofuel production

Mukhopadhyay, A., Redding, A. M., Rutherford, B. J., & Keasling, J. D. (2008) · Current Opinion in Biotechnology

Microbial Metabolic Engineering and BioproductionBiofuel production and bioconversion

Cited by 129

IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata

Camargo, A. P., Call, L., Roux, S., Nayfach, S., Huntemann, M., Palaniappan, K., Ratner, A., Chu, K., Mukherjeep, S., Reddy, T. B. K., et al. (2024) · Nucleic Acids Research

Genomics and Phylogenetic StudiesBacterial Genetics and Biotechnology

Cited by 87

Nitrogen Metabolism in Pseudomonas putida: Functional Analysis Using Random Barcode Transposon Sequencing

Schmidt, M., Pearson, A. N., Incha, M. R., Thompson, M. G., Baidoo, E. E. K., Kakumanu, R., Mukhopadhyay, A., Shih, P. M., Deutschbauer, A. M., Blank, L. M., et al. (2022) · Applied and Environmental Microbiology

Microbial Metabolic Engineering and BioproductionBacterial Genetics and Biotechnology

Cited by 28

Biosensor-Driven Strain Engineering Reveals Key Cellular Processes for Maximizing Isoprenol Production in Pseudomonas putida

Menasalvas, J., Kulakowski, S., Chen, Y., Gin, J. W., Turumtay, E. A., Baral, N. R., Apolonio, M. A., Rivier, A., Yunus, I. S., Garber, M. E., et al. (2025) · Science Advances

Microbial Metabolic Engineering and BioproductionPlant biochemistry and biosynthesis

Cited by 10

Nitrogen metabolism in Pseudomonas putida : functional analysis using random barcode transposon sequencing

Schmidt, M., Pearson, A. N., Incha, M. R., Thompson, M. G., Baidoo, E. E. K., Kakumanu, R., Mukhopadhyay, A., Shih, P. M., Deutschbauer, A. M., Blank, L. M., et al. (2021) · bioRxiv (Cold Spring Harbor Laboratory)

Microbial Metabolic Engineering and BioproductionBacterial Genetics and Biotechnology

Cited by 2

REC protein family expansion by the emergence of a new signaling pathway

Garber, M. E., Frank, V., Kazakov, A. E., Incha, M. R., Nava, A. A., Zhang, H., Valencia, L. E., Keasling, J. D., Rajeev, L., & Mukhopadhyay, A. (2023) · mBio

Bacterial Genetics and BiotechnologyGenomics and Phylogenetic Studies

Cited by 0