Macrina, Thomas

Neuronal wiring diagram of an adult brain

Dorkenwald, S., Matsliah, A., Sterling, A. R., Schlegel, P., Yu, S.-C., McKellar, C. E., Lin, A., Costa, M., Eichler, K., Yin, Y., et al. (2024) · Nature

Neurobiology and Insect Physiology ResearchNeuroscience and Neuropharmacology Research

Cited by 570

Whole-brain annotation and multi-connectome cell typing of Drosophila

Schlegel, P., Yin, Y., Bates, A. S., Dorkenwald, S., Eichler, K., Brooks, P., Han, D. S., Gkantia, M., dos Santos, M., Munnelly, E. J., et al. (2024) · Nature

Neurobiology and Insect Physiology ResearchCell Image Analysis Techniques

Cited by 413

FlyWire: online community for whole-brain connectomics

Dorkenwald, S., McKellar, C. E., Macrina, T., Kemnitz, N., Lee, K., Lu, R., Wu, J., Popovych, S., Mitchell, E., Nehoran, B., et al. (2022) · Nature Methods

Cell Image Analysis TechniquesNeurobiology and Insect Physiology Research

Cited by 289

Functional connectomics spanning multiple areas of mouse visual cortex

The MICrONS Consortium, Bae, J. A., Baptiste, M., Bishop, C. A., Bodor, A. L., Brittain, D., Buchanan, J., Bumbarger, D. J., Castro, M. A., Celii, B., et al. (2021) · bioRxiv (Cold Spring Harbor Laboratory)

Visual perception and processing mechanismsNeuroscience and Neuropharmacology Research

Cited by 214

Reconstruction of neocortex: Organelles, compartments, cells, circuits, and activity

Turner, N. L., Macrina, T., Bae, J. A., Yang, R., Wilson, A. M., Schneider-Mizell, C., Lee, K., Lu, R., Wu, J., Bodor, A. L., et al. (2022) · Cell

Neuroscience and Neuropharmacology ResearchCell Image Analysis Techniques

Cited by 206

Neuronal wiring diagram of an adult brain

Dorkenwald, S., Matsliah, A., Sterling, A. R., Schlegel, P., Yu, S.-C., McKellar, C. E., Lin, A., Costa, M., Eichler, K., Yin, Y., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory)

Neurobiology and Insect Physiology ResearchCell Image Analysis Techniques

Cited by 149

Binary and analog variation of synapses between cortical pyramidal neurons

Dorkenwald, S., Turner, N. L., Macrina, T., Lee, K., Lu, R., Wu, J., Bodor, A. L., Bleckert, A. A., Brittain, D., Kemnitz, N., et al. (2019) · eLife

Neuroscience and Neuropharmacology ResearchNeural dynamics and brain function

Cited by 130

Connectomic reconstruction of a female Drosophila ventral nerve cord

Azevedo, A., Lesser, E., Phelps, J. S., Mark, B., Elabbady, L., Kuroda, S., Sustar, A., Moussa, A., Khandelwal, A., Dallmann, C. J., et al. (2024) · Nature

Neurobiology and Insect Physiology ResearchCell Image Analysis Techniques

Cited by 120

Tools for connectomic reconstruction and analysis of a female Drosophila ventral nerve cord

Azevedo, A., Lesser, E., Phelps, J. S., Mark, B., Elabbady, L., Kuroda, S., Sustar, A., Moussa, A., Kandelwal, A., Dallmann, C. J., et al. (2022) · Nature

Neurobiology and Insect Physiology ResearchCell Image Analysis Techniques

Cited by 120

The neural basis for a persistent internal state in Drosophila females

Deutsch, D., Pacheco, D., Encarnacion-Rivera, L., Pereira, T., Fathy, R., Clemens, J., Girardin, C., Calhoun, A., Ireland, E., Burke, A., et al. (2020) · eLife

Neurobiology and Insect Physiology ResearchNeuroscience and Neuropharmacology Research

Cited by 115

The Neural Basis for a Persistent Internal State in Drosophila Females

Deutsch, D., Pacheco, D. A., Encarnacion-Rivera, L. J., Pereira, T., Fathy, R., Calhoun, A., Ireland, E. C., Burke, A. T., Dorkenwald, S., McKellar, C., et al. (2020) · eLife

Neurobiology and Insect Physiology ResearchNeuroscience and Neuropharmacology Research

Cited by 115

CAVE: Connectome Annotation Versioning Engine

Dorkenwald, S., Schneider-Mizell, C. M., Brittain, D., Halageri, A., Jordan, C., Kemnitz, N., Castro, M. A., Silversmith, W., Maitin-Shephard, J., Troidl, J., et al. (2023) · Nature Methods

Cell Image Analysis TechniquesScientific Computing and Data Management

Cited by 79

Synaptic architecture of leg and wing premotor control networks in Drosophila

Lesser, E., Azevedo, A. W., Phelps, J. S., Elabbady, L., Cook, A., Syed, D. S., Mark, B., Kuroda, S., Sustar, A., Moussa, A., et al. (2023) · Nature

Neurobiology and Insect Physiology ResearchMotor Control and Adaptation

Cited by 71

Synaptic architecture of leg and wing premotor control networks in Drosophila

Lesser, E., Azevedo, A. W., Phelps, J. S., Elabbady, L., Cook, A., Syed, D. S., Mark, B., Kuroda, S., Sustar, A., Moussa, A., et al. (2024) · Nature

Neurobiology and Insect Physiology ResearchMotor Control and Adaptation

Cited by 71

Petascale neural circuit reconstruction: automated methods

Macrina, T., Lee, K., Lu, R., Turner, N. L., Wu, J., Popovych, S., Silversmith, W., Kemnitz, N., Bae, J. A., Castro, M. A., et al. (2021) · bioRxiv (Cold Spring Harbor Laboratory)

Cell Image Analysis TechniquesAdvanced Electron Microscopy Techniques and Applications

Cited by 55

Convolutional nets for reconstructing neural circuits from brain images acquired by serial section electron microscopy

Lee, K., Turner, N., Macrina, T., Wu, J., Lu, R., & Seung, H. S. (2019) · Current Opinion in Neurobiology

Cell Image Analysis TechniquesAdvanced Electron Microscopy Techniques and Applications

Cited by 52

Petascale pipeline for precise alignment of images from serial section electron microscopy

Popovych, S., Macrina, T., Kemnitz, N., Castro, M., Nehoran, B., Jia, Z., Bae, J. A., Mitchell, E., Mu, S., Trautman, E. T., et al. (2024) · Nature Communications

Advanced Electron Microscopy Techniques and ApplicationsCell Image Analysis Techniques

Cited by 39