Morris, Benjamin

The Allen Cell and Structure Segmenter: a new open source toolkit for segmenting 3D intracellular structures in fluorescence microscopy images

Chen, J., Ding, L., Viana, M. P., Lee, H., Sluezwski, M. F., Morris, B., Hendershott, M. C., Yang, R., Mueller, I. A., & Rafelski, S. M. (2018) · bioRxiv (Cold Spring Harbor Laboratory)

Cell Image Analysis TechniquesMedical Image Segmentation Techniques

Cited by 99

Interpretable representation learning for 3D multi-piece intracellular structures using point clouds

Vasan, R., Ferrante, A. J., Borensztejn, A., Frick, C. L., Garrison, P., Gaudreault, N., Mogre, S. S., Mohammed, F. S., Morris, B., Pires, G. G., et al. (2025) · Nature Methods

Cell Image Analysis TechniquesTopological and Geometric Data Analysis

Cited by 7

Colony context and size-dependent compensation mechanisms give rise to variations in nuclear growth trajectories

Dixon, J. C., Frick, C. L., Leveille, C. L., Garrison, P., Lee, P. A., Mogre, S. S., Morris, B., Nivedita, N., Vasan, R., Chen, J., et al. (2024) · Cell Systems

Cell Image Analysis TechniquesGene Regulatory Network Analysis

Cited by 3