Squair, Jordan W.

Confronting false discoveries in single-cell differential expression

Squair, J. W., Gautier, M., Kathe, C., Anderson, M. A., James, N. D., Hutson, T. H., Hudelle, R., Qaiser, T., Matson, K. J. E., Barraud, Q., et al. (2021) · Nature Communications

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 1,086

The neurons that restore walking after paralysis

Kathe, C., Skinnider, M. A., Hutson, T. H., Regazzi, N., Gautier, M., Demesmaeker, R., Komi, S., Ceto, S., James, N. D., Cho, N., et al. (2022) · Nature

Spinal Cord Injury ResearchNerve injury and regeneration

Cited by 304

Cell type prioritization in single-cell data

Skinnider, M. A., Squair, J. W., Kathe, C., Anderson, M. A., Gautier, M., Matson, K. J. E., Milano, M., Hutson, T. H., Barraud, Q., Phillips, A. A., et al. (2021) · Nature Biotechnology

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 274

Evaluating measures of association for single-cell transcriptomics

Skinnider, M. A., Squair, J. W., & Foster, L. J. (2019) · Nature Methods

Single-cell and spatial transcriptomicsBioinformatics and Genomic Networks

Cited by 145

Prioritization of cell types responsive to biological perturbations in single-cell data with Augur

Squair, J. W., Skinnider, M. A., Gautier, M., Foster, L. J., & Courtine, G. (2021) · Nature Protocols

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 61