Danko, Charles G.

Analysis of nascent RNA identifies a unified architecture of initiation regions at mammalian promoters and enhancers

Core, L. J., Martins, A. L., Danko, C. G., Waters, C. T., Siepel, A., & Lis, J. T. (2014) · Nature Genetics

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

Cited by 693

Mammalian heat shock response and mechanisms underlying its genome-wide transcriptional regulation

Mahat, D. B., Salamanca, H. H., Duarte, F. M., Danko, C. G., & Lis, J. T. (2016) · Molecular Cell

Heat shock proteins researchGenomics and Chromatin Dynamics

Cited by 426

Signaling Pathways Differentially Affect RNA Polymerase II Initiation, Pausing, and Elongation Rate in Cells

Danko, C. G., Hah, N., Luo, X., Martins, A. L., Core, L., Lis, J. T., Siepel, A., & Kraus, W. L. (2013) · Molecular Cell

Genomics and Chromatin DynamicsRNA Research and Splicing

Cited by 333

Transcriptional response to stress is pre-wired by promoter and enhancer architecture

Vihervaara, A., Mahat, D. B., Guertin, M. J., Chu, T., Danko, C. G., Lis, J. T., & Sistonen, L. (2017) · Nature Communications

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

Cited by 164

Chromatin conformation remains stable upon extensive transcriptional changes driven by heat shock

Ray, J., Munn, P. R., Vihervaara, A., Lewis, J. J., Ozer, A., Danko, C. G., & Lis, J. T. (2019) · Proceedings of the National Academy of Sciences

Genomics and Chromatin DynamicsHeat shock proteins research

Cited by 109

Simultaneous multiplexed amplicon sequencing and transcriptome profiling in single cells

Saikia, M., Burnham, P., Keshavjee, S. H., Wang, M. F. Z., Heyang, M., Moral-Lopez, P., Hinchman, M. M., Danko, C. G., Parker, J. S. L., & De Vlaminck, I. (2019) · Nature Methods

Single-cell and spatial transcriptomicsInnovative Microfluidic and Catalytic Techniques Innovation

Cited by 75