Waegeman, Willem

Explainability in transformer models for functional genomics

Clauwaert, J., Menschaert, G., & Waegeman, W. (2021) · Briefings in Bioinformatics

Explainable Artificial Intelligence (XAI)Genomics and Chromatin Dynamics

Cited by 60

CpG Transformer for imputation of single-cell methylomes

De Waele, G., Clauwaert, J., Menschaert, G., & Waegeman, W. (2021) · Bioinformatics

Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics

Cited by 37

CpG Transformer for imputation of single-cell methylomes

De Waele, G., Clauwaert, J., Menschaert, G., & Waegeman, W. (2022) · Bioinformatics

Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics

Cited by 37

Pre-trained Maldi Transformers improve MALDI-TOF MS-based prediction

De Waele, G., Menschaert, G., Vandamme, P., & Waegeman, W. (2024) · Computers in Biology and Medicine

Bacterial Identification and Susceptibility TestingMass Spectrometry Techniques and Applications

Cited by 17

Pitfalls of Epistemic Uncertainty Quantification Through Loss Minimisation

Bengs, V., Hüllermeier, E., & Waegeman, W. (2022) · Advances in Neural Information Processing Systems 35

Probabilistic and Robust Engineering DesignGaussian Processes and Bayesian Inference

Cited by 15