Tarafder, Sumit

EquiPNAS: improved protein–nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks

Roche, R., Moussad, B., Shuvo, M. H., Tarafder, S., & Bhattacharya, D. (2024) · Nucleic Acids Research

Machine Learning in BioinformaticsProtein Structure and Dynamics

Cited by 85

EquiPNAS: improved protein-nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks

Roche, R., Moussad, B., Shuvo, M. H., Tarafder, S., & Bhattacharya, D. (2023) · Nucleic Acids Research

Machine Learning in BioinformaticsProtein Structure and Dynamics

Cited by 84

lociPARSE: A Locality-aware Invariant Point Attention Model for Scoring RNA 3D Structures

Tarafder, S., & Bhattacharya, D. (2024) · Journal of Chemical Information and Modeling

RNA and protein synthesis mechanismsProtein Structure and Dynamics

Cited by 11

Single-sequence protein-RNA complex structure prediction by geometric attention-enabled pairing of biological language models

Roche, R., Tarafder, S., & Bhattacharya, D. (2024) · Cell Systems

Protein Structure and DynamicsRNA and protein synthesis mechanisms

Cited by 4