Gertz, Jason

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Landt, S. G., Marinov, G. K., Kundaje, A., Kheradpour, P., Pauli, F., Batzoglou, S., Bernstein, B. E., Bickel, P., Brown, J. B., Cayting, P., et al. (2012) · Genome Research

Genomics and Chromatin DynamicsGenomics and Phylogenetic Studies

Cited by 2,033

Widespread plasticity in CTCF occupancy linked to DNA methylation

Wang, H., Maurano, M. T., Qu, H., Varley, K. E., Gertz, J., Pauli, F., Lee, K., Canfield, T., Weaver, M., Sandstrom, R., et al. (2012) · Genome Research

Genomics and Chromatin DynamicsEpigenetics and DNA Methylation

Cited by 588

From single-cell to cell-pool transcriptomes: Stochasticity in gene expression and RNA splicing

Marinov, G. K., Williams, B. A., McCue, K., Schroth, G. P., Gertz, J., Myers, R. M., & Wold, B. J. (2014) · Genome Research

Single-cell and spatial transcriptomicsRNA Research and Splicing

Cited by 468

A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology

Guillen, K. P., Fujita, M., Butterfield, A. J., Scherer, S. D., Bailey, M. H., Chu, Z., DeRose, Y. S., Zhao, L., Cortes-Sanchez, E., Yang, C.-H., et al. (2022) · Nature Cancer

Cancer Cells and MetastasisBreast Cancer Treatment Studies

Cited by 416

Analysis of combinatorial cis-regulation in synthetic and genomic promoters

Gertz, J., Siggia, E. D., & Cohen, B. A. (2009) · Nature

Gene Regulatory Network AnalysisGenomics and Chromatin Dynamics

Cited by 304

CTCF/cohesin-mediated DNA looping is required for protocadherin α promoter choice

Guo, Y., Monahan, K., Wu, H., Gertz, J., Varley, K. E., Li, W., Myers, R. M., Maniatis, T., & Wu, Q. (2012) · Proceedings of the National Academy of Sciences

Genomics and Chromatin DynamicsDevelopmental Biology and Gene Regulation

Cited by 258

Post-mortem molecular profiling of three psychiatric disorders

Ramaker, R. C., Bowling, K. M., Lasseigne, B. N., Hagenauer, M. H., Hardigan, A. A., Davis, N. S., Gertz, J., Cartagena, P. M., Walsh, D. M., Vawter, M. P., et al. (2017) · Genome Medicine

Schizophrenia research and treatmentGenetic Associations and Epidemiology

Cited by 219

The hypersensitive glucocorticoid response specifically regulates period 1 and expression of circadian genes

Reddy, T. E., Gertz, J., Crawford, G. E., Garabedian, M. J., & Myers, R. M. (2012) · Molecular and Cellular Biology

Circadian rhythm and melatoninEstrogen and related hormone effects

Cited by 149

Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design

Weber, L. M., Hippen, A. A., Hickey, P. F., Berrett, K. C., Gertz, J., Doherty, J. A., Greene, C. S., & Hicks, S. C. (2021) · GigaScience

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 37

Mapping genome-wide transcription factor binding sites in frozen tissues

Savic, D., Gertz, J., Jain, P., Cooper, G. M., & Myers, R. M. (2013) · Epigenetics & Chromatin

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

Cited by 31