Li, Jingyi Jessica

Statistics or biology: the zero-inflation controversy about scRNA-seq data

Jiang, R., Sun, T., Song, D., & Li, J. J. (2022) · Genome Biology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 614

Exaggerated false positives by popular differential expression methods when analyzing human population samples

Li, Y., Ge, X., Peng, F., Li, W., & Li, J. J. (2022) · Genome Biology

Gene expression and cancer classificationGenomics and Phylogenetic Studies

Cited by 303

System wide analyses have underestimated protein abundances and the importance of transcription in mammals

Li, J. J., Bickel, P. J., & Biggin, M. D. (2014) · PeerJ

RNA and protein synthesis mechanismsAdvanced Proteomics Techniques and Applications

Cited by 279

Benchmarking Computational Doublet-Detection Methods for Single-Cell RNA Sequencing Data

Xi, N. M., & Li, J. J. (2021) · Cell Systems

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 208

Trusting Virtual Agents: The Effect of Personality

Zhou, M. X., Mark, G., Li, J., & Yang, H. (2019) · ACM Transactions on Interactive Intelligent Systems

Social Robot Interaction and HRIAI in Service Interactions

Cited by 176

scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

Wang, W., Cen, Y., Lu, Z., Xu, Y., Sun, T., Xiao, Y., Liu, W., Li, J. J., & Wang, C. (2024) · Genome Biology

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 19

Epigenome overlap measure (EPOM) for comparing tissue/cell types based on chromatin states

Li, W. V., Razaee, Z. S., & Li, J. J. (2016) · BMC Genomics

Genomics and Chromatin DynamicsEpigenetics and DNA Methylation

Cited by 10

Quantitative Principles of cis -translational control by general mRNA sequence features in eukaryotes

Li, J. J., Chew, G.-L., & Biggin, M. D. (2019) · bioRxiv (Cold Spring Harbor Laboratory)

RNA and protein synthesis mechanismsRNA Research and Splicing

Cited by 1