Weinreb, Caleb

Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia

Brann, D. H., Tsukahara, T., Weinreb, C., Lipovsek, M., Van den Berge, K., Gong, B., Chance, R., Macaulay, I. C., Chou, H.-J., Fletcher, R. B., et al. (2020) · Science Advances

Olfactory and Sensory Function StudiesSARS-CoV-2 and COVID-19 Research

Cited by 1,198

Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo

Wagner, D. E., Weinreb, C., Collins, Z. M., Briggs, J. A., Megason, S. G., & Klein, A. M. (2018) · Science

Single-cell and spatial transcriptomicsDevelopmental Biology and Gene Regulation

Cited by 849

Lineage tracing on transcriptional landscapes links state to fate during differentiation

Weinreb, C., Rodriguez-Fraticelli, A., Camargo, F. D., & Klein, A. M. (2020) · Science

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 759

Clonal analysis of lineage fate in native haematopoiesis

Rodriguez-Fraticelli, A. E., Wolock, S. L., Weinreb, C. S., Panero, R., Patel, S. H., Jankovic, M., Sun, J., Calogero, R. A., Klein, A. M., & Camargo, F. D. (2018) · Nature

Hematopoietic Stem Cell TransplantationAcute Myeloid Leukemia Research

Cited by 596

Population snapshots predict early haematopoietic and erythroid hierarchies

Tusi, B. K., Wolock, S. L., Weinreb, C., Hwang, Y., Hidalgo, D., Zilionis, R., Waisman, A., Huh, J. R., Klein, A. M., & Socolovsky, M. (2018) · Nature

Hematopoietic Stem Cell TransplantationSingle-cell and spatial transcriptomics

Cited by 384

Fundamental limits on dynamic inference from single-cell snapshots

Weinreb, C., Wolock, S., Tusi, B. K., Socolovsky, M., & Klein, A. M. (2018) · Proceedings of the National Academy of Sciences

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 341

SPRING: a kinetic interface for visualizing high dimensional single-cell expression data

Weinreb, C., Wolock, S., & Klein, A. M. (2018) · Bioinformatics

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 298

A single-cell hematopoietic landscape resolves 8 lineage trajectories and defects in Kit mutant mice

Dahlin, J. S., Hamey, F. K., Pijuan-Sala, B., Shepherd, M., Lau, W. W. Y., Nestorowa, S., Weinreb, C., Wolock, S., Hannah, R., Diamanti, E., et al. (2018) · Blood

Single-cell and spatial transcriptomicsHematopoietic Stem Cell Transplantation

Cited by 233

Keypoint-MoSeq: parsing behavior by linking point tracking to pose dynamics

Weinreb, C., Pearl, J. E., Lin, S., Osman, M. A. M., Zhang, L., Annapragada, S., Conlin, E., Hoffmann, R., Makowska, S., Gillis, W. F., et al. (2024) · Nature Methods

Human Pose and Action RecognitionNeurobiology and Insect Physiology Research

Cited by 228

3D RNA and Functional Interactions from Evolutionary Couplings

Weinreb, C., Riesselman, A. J., Ingraham, J. B., Gross, T., Sander, C., & Marks, D. S. (2016) · Cell

RNA and protein synthesis mechanismsProtein Structure and Dynamics

Cited by 159

Fundamental limits on dynamic inference from single cell snapshots

Weinreb, C., Wolock, S., Tusi, B. K., Socolovsky, M., & Klein, A. M. (2017) · bioRxiv (Cold Spring Harbor Laboratory)

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 27