Greener, Joe G.

A guide to machine learning for biologists

Greener, J. G., Kandathil, S. M., Moffat, L., & Jones, D. T. (2022) · Nature Reviews Molecular Cell Biology

Machine Learning in BioinformaticsGene expression and cancer classification

Cited by 2,127

Deep learning extends de novo protein modelling coverage of genomes using iteratively predicted structural constraints

Greener, J. G., Kandathil, S. M., & Jones, D. T. (2019) · Nature Communications

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 178

Structure-based prediction of protein allostery

Greener, J. G., & Sternberg, M. J. (2018) · Current Opinion in Structural Biology

Protein Structure and DynamicsComputational Drug Discovery Methods

Cited by 91

High‐Throughput Kinetic Analysis for Target‐Directed Covalent Ligand Discovery

Craven, G. B., Affron, D. P., Allen, C. E., Matthies, S., Greener, J. G., Morgan, R. M. L., Tate, E. W., Armstrong, A., & Mann, D. J. (2018) · Angewandte Chemie International Edition

Click Chemistry and ApplicationsHeterocyclic Compound Synthesis and Bioactivity

Cited by 73

Using AlphaFold for Rapid and Accurate Fixed Backbone Protein Design

Moffat, L., Greener, J. G., & Jones, D. T. (2021) · bioRxiv (Cold Spring Harbor Laboratory)

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 33

Differentiable molecular simulation can learn all the parameters in a coarse-grained force field for proteins

Greener, J. G., & Jones, D. T. (2021) · PLOS ONE

Protein Structure and DynamicsComputational Drug Discovery Methods

Cited by 29

Fast protein structure searching using structure graph embeddings

Greener, J. G., & Jamali, K. (2024) · Bioinformatics Advances

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 19

Fast protein structure searching using structure graph embeddings

Greener, J. G., & Jamali, K. (2022) · Bioinformatics Advances

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 19

Ultrafast end-to-end protein structure prediction enables high-throughput exploration of uncharacterised proteins

Kandathil, S. M., Greener, J. G., Lau, A. M., & Jones, D. T. (2020) · bioRxiv (Cold Spring Harbor Laboratory)

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 8