Wei, Chih-Hsuan

PubTator central: automated concept annotation for biomedical full text articles

Wei, C.-H., Allot, A., Leaman, R., & Lu, Z. (2019) · Nucleic Acids Research

Biomedical Text Mining and OntologiesGenomics and Phylogenetic Studies

Cited by 400

Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task

Wei, C.-H., Peng, Y., Leaman, R., Davis, A. P., Mattingly, C. J., Li, J., Wiegers, T. C., & Lu, Z. (2016) · Database

Biomedical Text Mining and OntologiesAdvanced Text Analysis Techniques

Cited by 198

On expert curation and scalability: UniProtKB/Swiss-Prot as a case study

Poux, S., Arighi, C. N., Magrane, M., Bateman, A., Wei, C.-H., Lu, Z., Boutet, E., Bye-A-Jee, H., Famiglietti, M. L., Roechert, B., et al. (2017) · Bioinformatics

Biomedical Text Mining and OntologiesBioinformatics and Genomic Networks

Cited by 135

Advancing entity recognition in biomedicine via instruction tuning of large language models

Keloth, V. K., Hu, Y., Xie, Q., Peng, X., Wang, Y., Zheng, A., Selek, M., Raja, K., Wei, C. H., Jin, Q., et al. (2024) · Bioinformatics

Biomedical Text Mining and OntologiesTopic Modeling

Cited by 104

BioConceptVec: Creating and evaluating literature-based biomedical concept embeddings on a large scale

Chen, Q., Lee, K., Yan, S., Kim, S., Wei, C.-H., & Lu, Z. (2020) · PLOS Computational Biology

Biomedical Text Mining and OntologiesBioinformatics and Genomic Networks

Cited by 62

Scaling up data curation using deep learning: An application to literature triage in genomic variation resources

Lee, K., Famiglietti, M. L., McMahon, A., Wei, C.-H., MacArthur, J. A. L., Poux, S., Breuza, L., Bridge, A., Cunningham, F., Xenarios, I., et al. (2018) · PLOS Computational Biology

Biomedical Text Mining and OntologiesInformation Retrieval and Search Behavior

Cited by 47

Biomedical Mention Disambiguation using a Deep Learning Approach

Wei, C.-H., Lee, K., Leaman, R., & Lu, Z. (2019) · arXiv

Biomedical Text Mining and OntologiesTopic Modeling

Cited by 17

Using deep learning to identify translational research in genomic medicine beyond bench to bedside

Hsu, Y.-Y., Clyne, M., Wei, C.-H., Khoury, M. J., & Lu, Z. (2019) · Database

Biomedical Text Mining and OntologiesText and Document Classification Technologies

Cited by 6