Lupo, Umberto

Protein language models trained on multiple sequence alignments learn phylogenetic relationships

Lupo, U., Sgarbossa, D., & Bitbol, A.-F. (2022) · Nature Communications

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 67

Protein language models trained on multiple sequence alignments learn phylogenetic relationships

Lupo, U., Sgarbossa, D., & Bitbol, A.-F. (2022) · Nature Communications

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 67

Generative power of a protein language model trained on multiple sequence alignments

Sgarbossa, D., Lupo, U., & Bitbol, A.-F. (2022) · eLife

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 43

Pairing interacting protein sequences using masked language modeling

Lupo, U., Sgarbossa, D., & Bitbol, A.-F. (2024) · Proceedings of the National Academy of Sciences

Machine Learning in BioinformaticsProtein Structure and Dynamics

Cited by 31

Pairing interacting protein sequences using masked language modeling

Lupo, U., Sgarbossa, D., & Bitbol, A.-F. (2023) · Proceedings of the National Academy of Sciences

Machine Learning in BioinformaticsProtein Structure and Dynamics

Cited by 31

Impact of phylogeny on structural contact inference from protein sequence data

Dietler, N., Lupo, U., & Bitbol, A.-F. (2023) · Journal of The Royal Society Interface

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 6

Impact of phylogeny on structural contact inference from protein sequence data

Dietler, N., Lupo, U., & Bitbol, A.-F. (2022) · Journal of The Royal Society Interface

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 6