Bairoch, Amos

The Universal Protein Resource (UniProt)

Bairoch, A. (2004) · Nucleic Acids Research

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 3,774

InterPro: the integrative protein signature database

Hunter, S., Apweiler, R., Attwood, T. K., Bairoch, A., Bateman, A., Binns, D., Bork, P., Das, U., Daugherty, L., Duquenne, L., et al. (2009) · Nucleic Acids Research

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 2,107

New families in the classification of glycosyl hydrolases based on amino acid sequence similarities

Henrissat, B., & Bairoch, A. (1993) · Biochemical Journal

Enzyme Production and CharacterizationGenomics and Phylogenetic Studies

Cited by 1,974

ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins

de Castro, E., Sigrist, C. J. A., Gattiker, A., Bulliard, V., Langendijk-Genevaux, P. S., Gasteiger, E., Bairoch, A., & Hulo, N. (2006) · Nucleic Acids Research

Genomics and Phylogenetic StudiesMachine Learning in Bioinformatics

Cited by 1,686

A large-scale evaluation of computational protein function prediction

Radivojac, P., Clark, W. T., Oron, T. R., Schnoes, A. M., Wittkop, T., Sokolov, A., Graim, K., Funk, C., Verspoor, K., Ben-Hur, A., et al. (2013) · Nature Methods

Bioinformatics and Genomic NetworksMachine Learning in Bioinformatics

Cited by 1,028

The Cellosaurus, a Cell-Line Knowledge Resource

Bairoch, A. (2018) · Journal of Biomolecular Techniques JBT

Research Data Management PracticesBiomedical Text Mining and Ontologies

Cited by 807

Mass spectrometry in high-throughput proteomics: ready for the big time

Nilsson, T., Mann, M., Aebersold, R., Yates, J. R., Bairoch, A., & Bergeron, J. J. M. (2010) · Nature Methods

Advanced Proteomics Techniques and ApplicationsMass Spectrometry Techniques and Applications

Cited by 470

ViralZone: a knowledge resource to understand virus diversity

Hulo, C., de Castro, E., Masson, P., Bougueleret, L., Bairoch, A., Xenarios, I., & Le Mercier, P. (2011) · Nucleic Acids Research

Genomics and Phylogenetic StudiesBacteriophages and microbial interactions

Cited by 452

The human proteome project: current state and future direction

Legrain, P., Aebersold, R., Archakov, A., Bairoch, A., Bala, K., Beretta, L., Bergeron, J., Borchers, C. H., Corthals, G. L., Costello, C. E., et al. (2011) · Molecular & Cellular Proteomics

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 352

The chromosome-centric human proteome project for cataloging proteins encoded in the genome

Paik, Y.-K., Jeong, S.-K., Omenn, G. S., Uhlen, M., Hanash, S., Cho, S. Y., Lee, H.-J., Na, K., Choi, E.-Y., Yan, F., et al. (2012) · Nature Biotechnology

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 288

A high-stringency blueprint of the human proteome

Adhikari, S., Nice, E. C., Deutsch, E. W., Lane, L., Omenn, G. S., Pennington, S. R., Paik, Y.-K., Overall, C. M., Corrales, F. J., Cristea, I. M., et al. (2020) · Nature Communications

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 210

The neXtProt knowledgebase on human proteins: 2017 update

Gaudet, P., Michel, P.-A., Zahn-Zabal, M., Britan, A., Cusin, I., Domagalski, M., Duek, P. D., Gateau, A., Gleizes, A., Hinard, V., et al. (2017) · Nucleic Acids Research

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 164

Metrics for the Human Proteome Project 2013–2014 and Strategies for Finding Missing Proteins

Lane, L., Bairoch, A., Beavis, R. C., Deutsch, E. W., Gaudet, P., Lundberg, E., & Omenn, G. S. (2014) · Journal of Proteome Research

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 129

neXtProt: Organizing Protein Knowledge in the Context of Human Proteome Projects

Gaudet, P., Argoud-Puy, G., Cusin, I., Duek, P., Evalet, O., Gateau, A., Gleizes, A., Pereira, M., Zahn-Zabal, M., Zwahlen, C., et al. (2013) · Journal of Proteome Research

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 124

CLASTR: The Cellosaurus STR similarity search tool ‐ A precious help for cell line authentication

Robin, T., Capes‐Davis, A., & Bairoch, A. (2020) · International Journal of Cancer

Research Data Management PracticesViral Infectious Diseases and Gene Expression in Insects

Cited by 85

A Standard Nomenclature for Referencing and Authentication of Pluripotent Stem Cells

Kurtz, A., Seltmann, S., Bairoch, A., Bittner, M.-S., Bruce, K., Capes-Davis, A., Clarke, L., Crook, J. M., Daheron, L., Dewender, J., et al. (2018) · Stem Cell Reports

Pluripotent Stem Cells ResearchResearch Data Management Practices

Cited by 47

Incidences of problematic cell lines are lower in papers that use RRIDs to identify cell lines

Babic, Z., Capes-Davis, A., Martone, M. E., Bairoch, A., Ozyurt, I. B., Gillespie, T. H., & Bandrowski, A. E. (2019) · eLife

Research Data Management PracticesAcademic Publishing and Open Access

Cited by 44

Missing Protein Landscape of Human Chromosomes 2 and 14: Progress and Current Status

Duek, P., Bairoch, A., Gateau, A., Vandenbrouck, Y., & Lane, L. (2016) · Journal of Proteome Research

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 17