Bates, Alexander Shakeel

A connectome and analysis of the adult Drosophila central brain

Scheffer, L. K., Xu, C. S., Januszewski, M., Lu, Z., Takemura, S.-Y., Hayworth, K. J., Huang, G. B., Shinomiya, K., Maitlin-Shepard, J., Berg, S., et al. (2020) · eLife

Neurobiology and Insect Physiology ResearchCell Image Analysis Techniques

Cited by 1,128

Neuronal wiring diagram of an adult brain

Dorkenwald, S., Matsliah, A., Sterling, A. R., Schlegel, P., Yu, S.-C., McKellar, C. E., Lin, A., Costa, M., Eichler, K., Yin, Y., et al. (2024) · Nature

Neurobiology and Insect Physiology ResearchNeuroscience and Neuropharmacology Research

Cited by 570

Neurotransmitter classification from electron microscopy images at synaptic sites in Drosophila melanogaster

Eckstein, N., Bates, A. S., Champion, A., Du, M., Yin, Y., Schlegel, P., Lu, A. K.-Y., Rymer, T., Finley-May, S., Paterson, T., et al. (2024) · Cell

Neurobiology and Insect Physiology ResearchCell Image Analysis Techniques

Cited by 277

The natverse, a versatile toolbox for combining and analysing neuroanatomical data

Bates, A. S., Manton, J. D., Jagannathan, S. R., Costa, M., Schlegel, P., Rohlfing, T., & Jefferis, G. S. (2020) · eLife

Cell Image Analysis TechniquesUndergraduate Neuroscience Education and Research

Cited by 215

Information flow, cell types and stereotypy in a full olfactory connectome

Schlegel, P., Bates, A. S., Stürner, T., Jagannathan, S. R., Drummond, N., Hsu, J., Serratosa Capdevila, L., Javier, A., Marin, E. C., Barth-Maron, A., et al. (2021) · eLife

Neurobiology and Insect Physiology ResearchNeuroscience and Neuropharmacology Research

Cited by 178

Neurogenetic dissection of the Drosophila lateral horn reveals major outputs, diverse behavioural functions, and interactions with the mushroom body

Dolan, M.-J., Frechter, S., Bates, A. S., Dan, C., Huoviala, P., Roberts, R. J., Schlegel, P., Dhawan, S., Tabano, R., Dionne, H., et al. (2019) · eLife

Neurobiology and Insect Physiology ResearchNeuroscience and Neuropharmacology Research

Cited by 169

Neuronal wiring diagram of an adult brain

Dorkenwald, S., Matsliah, A., Sterling, A. R., Schlegel, P., Yu, S.-C., McKellar, C. E., Lin, A., Costa, M., Eichler, K., Yin, Y., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory)

Neurobiology and Insect Physiology ResearchCell Image Analysis Techniques

Cited by 149

Network statistics of the whole-brain connectome of Drosophila

Lin, A., Yang, R., Dorkenwald, S., Matsliah, A., Sterling, A. R., Schlegel, P., Yu, S.-C., McKellar, C. E., Costa, M., Eichler, K., et al. (2024) · Nature

Functional Brain Connectivity StudiesNeurobiology and Insect Physiology Research

Cited by 147

Network Statistics of the Whole-Brain Connectome of Drosophila

Lin, A., Yang, R., Dorkenwald, S., Matsliah, A., Sterling, A. R., Schlegel, P., Yu, S.-C., McKellar, C. E., Costa, M., Eichler, K., et al. (2023) · Nature

Functional Brain Connectivity StudiesNeurobiology and Insect Physiology Research

Cited by 147

Connectomics Analysis Reveals First-, Second-, and Third-Order Thermosensory and Hygrosensory Neurons in the Adult Drosophila Brain

Marin, E. C., Büld, L., Theiss, M., Sarkissian, T., Roberts, R. J. V., Turnbull, R., Tamimi, I. F. M., Pleijzier, M. W., Laursen, W. J., Drummond, N., et al. (2020) · Current Biology

Neurobiology and Insect Physiology ResearchIon Channels and Receptors

Cited by 121

Neurotransmitter Classification from Electron Microscopy Images at Synaptic Sites in Drosophila Melanogaster

Eckstein, N., Bates, A. S., Champion, A., Du, M., Yin, Y., Schlegel, P., Lu, A. K.-Y., Rymer, T., Finley-May, S., Paterson, T., et al. (2020) · bioRxiv (Cold Spring Harbor Laboratory)

Neurobiology and Insect Physiology ResearchCell Image Analysis Techniques

Cited by 115

Functional and anatomical specificity in a higher olfactory centre

Frechter, S., Bates, A. S., Tootoonian, S., Dolan, M.-J., Manton, J., Jamasb, A. R., Kohl, J., Bock, D., & Jefferis, G. (2019) · eLife

Neurobiology and Insect Physiology ResearchOlfactory and Sensory Function Studies

Cited by 105

Whole-brain annotation and multi-connectome cell typing quantifies circuit stereotypy in Drosophila

Schlegel, P., Yin, Y., Bates, A. S., Dorkenwald, S., Eichler, K., Brooks, P., Han, D. S., Gkantia, M., dos Santos, M., Munnelly, E. J., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory)

Neurobiology and Insect Physiology ResearchCell Image Analysis Techniques

Cited by 102

A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing

Shiu, P. K., Sterne, G. R., Spiller, N., Franconville, R., Sandoval, A., Zhou, J., Simha, N., Kang, C. H., Yu, S., Kim, J. S., et al. (2023) · Nature

Neurobiology and Insect Physiology ResearchNeural dynamics and brain function

Cited by 98

A Drosophila computational brain model reveals sensorimotor processing

Shiu, P. K., Sterne, G. R., Spiller, N., Franconville, R., Sandoval, A., Zhou, J., Simha, N., Kang, C. H., Yu, S., Kim, J. S., et al. (2024) · Nature

Neurobiology and Insect Physiology ResearchNeural dynamics and brain function

Cited by 97

Neuronal cell types in the fly: single-cell anatomy meets single-cell genomics

Bates, A. S., Janssens, J., Jefferis, G. S., & Aerts, S. (2019) · Current Opinion in Neurobiology

Neurobiology and Insect Physiology ResearchSingle-cell and spatial transcriptomics

Cited by 70

Neural circuit mechanisms for steering control in walking Drosophila

Rayshubskiy, A., Holtz, S. L., Bates, A. S., Vanderbeck, Q. X., Capdevila, L. S., Rockwell, V., & Wilson, R. I. (2020) · bioRxiv (Cold Spring Harbor Laboratory)

Neurobiology and Insect Physiology ResearchMotor Control and Adaptation

Cited by 64

Neural circuit basis of aversive odour processing in Drosophila from sensory input to descending output

Huoviala, P., Dolan, M.-J., Love, F. M., Myers, P., Frechter, S., Namiki, S., Pettersson, L., Roberts, R. J. V., Turnbull, R., Mitrevica, Z., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory)

Neurobiology and Insect Physiology ResearchNeuroscience and Neuropharmacology Research

Cited by 43

Comparative connectomics of Drosophila descending and ascending neurons

Stürner, T., Brooks, P., Serratosa Capdevila, L., Morris, B. J., Javier, A., Fang, S., Gkantia, M., Cachero, S., Beckett, I. R., Marin, E. C., et al. (2025) · Nature

Neurobiology and Insect Physiology ResearchNeuroscience and Neuropharmacology Research

Cited by 43

Neural circuit mechanisms for steering control in walking Drosophila

Rayshubskiy, A., Holtz, S. L., Bates, A. S., Vanderbeck, Q. X., Serratosa Capdevila, L., Rockwell, V., & Wilson, R. (2025) · eLife

Neurobiology and Insect Physiology ResearchMotor Control and Adaptation

Cited by 27

Author response: A connectome and analysis of the adult Drosophila central brain

Scheffer, L. K., Xu, C. S., Januszewski, M., Lu, Z., Takemura, S.-Y., Hayworth, K. J., Huang, G. B., Shinomiya, K., Maitlin-Shepard, J., Berg, S., et al. (2020) · eLife

Neurobiology and Insect Physiology ResearchNeuroscience and Neuropharmacology Research

Cited by 14

Neural circuit mechanisms for steering control in walking Drosophila

Rayshubskiy, A., Holtz, S. L., Bates, A., Vanderbeck, Q. X., Capdevila, L. S., & Wilson, R. I. (2024) · eLife

Neurobiology and Insect Physiology ResearchMotor Control and Adaptation

Cited by 5

Discriminative attribution from paired images

Eckstein, N., Bukhari, H., Bates, A. S., Jefferis, G. S. X. E., & Funke, J. (2023) · Lecture Notes in Computer Science

Explainable Artificial Intelligence (XAI)Advanced Neural Network Applications

Cited by 5

Author response: Information flow, cell types and stereotypy in a full olfactory connectome

Schlegel, P., Bates, A. S., Stürner, T., Jagannathan, S. R., Drummond, N., Hsu, J., Serratosa Capdevila, L., Javier, A., Marin, E. C., Barth-Maron, A., et al. (2021) · eLife

Neurobiology and Insect Physiology ResearchOlfactory and Sensory Function Studies

Cited by 1