Elofsson, Arne

Improved prediction of protein-protein interactions using AlphaFold2

Bryant, P., Pozzati, G., & Elofsson, A. (2021) · Nature Communications

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 1,022

Improved prediction of protein-protein interactions using AlphaFold2

Bryant, P., Pozzati, G., & Elofsson, A. (2021) · Nature Communications

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 1,015

A structural biology community assessment of AlphaFold2 applications

Akdel, M., Pires, D. E. V., Pardo, E. P., Jänes, J., Zalevsky, A. O., Mészáros, B., Bryant, P., Good, L. L., Laskowski, R. A., Pozzati, G., et al. (2022) · Nature Structural & Molecular Biology

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 675

Critical assessment of protein intrinsic disorder prediction

Necci, M., Piovesan, D., Predictors, C., Hoque, M. T., Walsh, I., Iqbal, S., Vendruscolo, M., Sormanni, P., Wang, C., Raimondi, D., et al. (2021) · Nature Methods

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 343

Towards a structurally resolved human protein interaction network

Burke, D. F., Bryant, P., Barrio-Hernandez, I., Memon, D., Pozzati, G., Shenoy, A., Zhu, W., Dunham, A. S., Albanese, P., Keller, A., et al. (2023) · Nature Structural & Molecular Biology

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 269

Towards a structurally resolved human protein interaction network

Elofsson, A., Burke, D., Bryant, P., Barrio-Hernandez, I., Memon, D., Pozzati, G., Shenoy, A., Zhu, W., Dunham, A., Albanese, P., et al. (2021) · Nature Structural & Molecular Biology

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 269

Predicting the structure of large protein complexes using AlphaFold and Monte Carlo tree search

Bryant, P., Pozzati, G., Zhu, W., Shenoy, A., Kundrotas, P., & Elofsson, A. (2022) · Nature Communications

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 226

Predicting the structure of large protein complexes using AlphaFold and Monte Carlo tree search.

Elofsson, A., Bryant, P., Pozzati, G., Zhu, W., Shenoy, A., & Kundrotas, P. (2022) · Nature Communications

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 226

Evaluation of AlphaFold-Multimer prediction on multi-chain protein complexes

Zhu, W., Shenoy, A., Kundrotas, P., & Elofsson, A. (2023) · Bioinformatics

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 202

A structural biology community assessment of AlphaFold 2 applications

Akdel, M., Pires, D. E. V., Porta Pardo, E., Jänes, J., Zalevsky, A. O., Mészáros, B., Bryant, P., Good, L. L., Laskowski, R. A., Pozzati, G., et al. (2021) · bioRxiv (Cold Spring Harbor Laboratory)

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 122

Why do eukaryotic proteins contain more intrinsically disordered regions?

Basile, W., Salvatore, M., Bassot, C., & Elofsson, A. (2019) · PLOS Computational Biology

Protein Structure and DynamicsRNA and protein synthesis mechanisms

Cited by 113

Protein sequence‐to‐structure learning: Is this the end(‐to‐end revolution)?

Laine, E., Eismann, S., Elofsson, A., & Grudinin, S. (2021) · Proteins: Structure, Function, and Bioinformatics

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 44

Limits and potential of combined folding and docking

Pozzati, G., Zhu, W., Bassot, C., Lamb, J., Kundrotas, P., & Elofsson, A. (2022) · Bioinformatics

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 25

AlphaFold3 at CASP16

Elofsson, A. (2026) · Proteins: Structure, Function, and Bioinformatics

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 24

Complementing machine learning‐based structure predictions with native mass spectrometry

Allison, T. M., Degiacomi, M. T., Marklund, E. G., Jovine, L., Elofsson, A., Benesch, J. L. P., & Landreh, M. (2022) · Protein Science

Mass Spectrometry Techniques and ApplicationsProtein Structure and Dynamics

Cited by 20

Evaluating deep learning based structure prediction methods on antibody–antigen complexes

Fromm, S., Ludaic, M., & Elofsson, A. (2026) · Bioinformatics

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 19

Evaluating Deep Learning Based Structure Prediction Methods on Antibody-Antigen Complexes

Fromm, S., Ludaic, M., & Elofsson, A. (2025) · Bioinformatics

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 19

Structural Host-Virus Interactome Profiling of Intact Infected Cells

Bogdanow, B., Mühlberg, L., Gruska, I., Vetter, B., Ruta, J., Elofsson, A., Wiebusch, L., & Liu, F. (2023) · Nature Communications

Advanced Proteomics Techniques and ApplicationsHerpesvirus Infections and Treatments

Cited by 15

Insights into the structure-function relationship of the NorQ/NorD chaperones from Paracoccus denitrificans reveal shared principles of interacting MoxR AAA+/VWA domain proteins

Kahle, M., Appelgren, S., Elofsson, A., Carroni, M., & Ädelroth, P. (2022) · BMC Biology

Enzyme Structure and FunctionMetalloenzymes and iron-sulfur proteins

Cited by 10

Insights into the structure-function relationship of the NorQ/NorD chaperones from Paracoccus denitrificans reveal shared principles of interacting MoxR AAA+/VWA domain proteins

Kahle, M., Appelgren, S., Elofsson, A., Carroni, M., & Ädelroth, P. (2023) · BMC Biology

Enzyme Structure and FunctionMetalloenzymes and iron-sulfur proteins

Cited by 10

Deep learning insights into the architecture of the mammalian egg-sperm fusion synapse

Elofsson, A., Han, L., Bianchi, E., Wright, G. J., & Jovine, L. (2024) · eLife

Reproductive Biology and FertilitySperm and Testicular Function

Cited by 8

Deep learning insights into the architecture of the mammalian egg-sperm fusion synapse

Elofsson, A., Han, L., Bianchi, E., Wright, G. J., & Jovine, L. (2023) · bioRxiv (Cold Spring Harbor Laboratory)

Reproductive Biology and FertilitySperm and Testicular Function

Cited by 3

Reliable Identification of Homodimers Using AlphaFold

Danielsson, S. N., & Elofsson, A. (2025) · bioRxiv (Cold Spring Harbor Laboratory)

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 0