Choi, Hyungwon

The CRAPome: a contaminant repository for affinity purification–mass spectrometry data

Mellacheruvu, D., Wright, Z., Couzens, A. L., Lambert, J.-P., St-Denis, N. A., Li, T., Miteva, Y. V., Hauri, S., Sardiu, M. E., Low, T. Y., et al. (2013) · Nature Methods

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 1,686

SAINT: probabilistic scoring of affinity purification–mass spectrometry data

Choi, H., Larsen, B., Lin, Z.-Y., Breitkreutz, A., Mellacheruvu, D., Fermin, D., Qin, Z. S., Tyers, M., Gingras, A.-C., & Nesvizhskii, A. I. (2011) · Nature Methods

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 800

Significance Analysis of Spectral Count Data in Label-free Shotgun Proteomics

Choi, H., Fermin, D., & Nesvizhskii, A. I. (2008) · Molecular & Cellular Proteomics

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 364

Differential dynamics of the mammalian mRNA and protein expression response to misfolding stress

Cheng, Z., Teo, G., Krueger, S., Rock, T., Koh, H. W. L., Choi, H., & Vogel, C. (2015) · Molecular Systems Biology

Endoplasmic Reticulum Stress and DiseaseRNA and protein synthesis mechanisms

Cited by 228

Differential dynamics of the mammalian mRNA and protein expression response to misfolding stress

Cheng, Z., Teo, G., Krueger, S., Rock, T. M., Koh, H. W., Choi, H., & Vogel, C. (2016) · Molecular Systems Biology

Endoplasmic Reticulum Stress and DiseaseRNA and protein synthesis mechanisms

Cited by 227

Metabolic Remodeling during Liver Regeneration

Caldez, M. J., Van Hul, N., Koh, H. W. L., Teo, X. Q., Fan, J. J., Tan, P. Y., Dewhurst, M. R., Too, P. G., Talib, S. Z. A., Chiang, B. E., et al. (2018) · Developmental Cell

Liver physiology and pathologyMetabolism, Diabetes, and Cancer

Cited by 133

SAINT-MS1: protein-protein interaction scoring using label-free intensity data in affinity purification-mass spectrometry experiments

Choi, H., Glatter, T., Gstaiger, M., & Nesvizhskii, A. I. (2012) · Journal of Proteome Research

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 68

Loss of hepatocyte cell division leads to liver inflammation and fibrosis

Dewhurst, M. R., Ow, J. R., Zafer, G., van Hul, N. K. M., Wollmann, H., Bisteau, X., Brough, D., Choi, H., & Kaldis, P. (2020) · PLOS Genetics

Liver physiology and pathologyDrug-Induced Hepatotoxicity and Protection

Cited by 42

PECA: A Novel Statistical Tool for Deconvoluting Time-Dependent Gene Expression Regulation

Teo, G., Vogel, C., Ghosh, D., Kim, S., & Choi, H. (2014) · Journal of Proteome Research

Gene Regulatory Network AnalysisFungal and yeast genetics research

Cited by 30

Re-mining serum proteomics data reveals extensive post-translational modifications upon Zika and dengue infection

Allgoewer, K., Wu, S., Choi, H., & Vogel, C. (2023) · Molecular Omics

Advanced Proteomics Techniques and ApplicationsMosquito-borne diseases and control

Cited by 5