Farek, Jesse

Curated variation benchmarks for challenging medically relevant autosomal genes

Wagner, J., Olson, N. D., Harris, L., McDaniel, J., Cheng, H., Fungtammasan, A., Hwang, Y.-C., Gupta, R., Wenger, A. M., Rowell, W. J., et al. (2022) · Nature Biotechnology

Genomics and Phylogenetic StudiesGenomics and Rare Diseases

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A diploid assembly-based benchmark for variants in the major histocompatibility complex

Chin, C.-S., Wagner, J., Zeng, Q., Garrison, E., Garg, S., Fungtammasan, A., Rautiainen, M., Aganezov, S., Kirsche, M., Zarate, S., et al. (2020) · Nature Communications

Genomics and Phylogenetic StudiesGenomic variations and chromosomal abnormalities

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FixItFelix: improving genomic analysis by fixing reference errors

Behera, S., LeFaive, J., Orchard, P., Mahmoud, M., Paulin, L. F., Farek, J., Soto, D. C., Parker, S. C. J., Smith, A. V., Dennis, M. Y., et al. (2023) · Genome Biology

Genomics and Phylogenetic StudiesGenomic variations and chromosomal abnormalities

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