Ceccarelli, Michele

RNA-Seq Signatures Normalized by mRNA Abundance Allow Absolute Deconvolution of Human Immune Cell Types

Monaco, G., Lee, B., Xu, W., Mustafah, S., Hwang, Y. Y., Carré, C., Burdin, N., Visan, L., Ceccarelli, M., Poidinger, M., et al. (2019) · Cell Reports

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 958

Proteogenomic and metabolomic characterization of human glioblastoma

Wang, L.-B., Karpova, A., Gritsenko, M. A., Kyle, J. E., Cao, S., Li, Y., Rykunov, D., Colaprico, A., Rothstein, J. H., Hong, R., et al. (2021) · Cancer Cell

Glioma Diagnosis and TreatmentCancer Genomics and Diagnostics

Cited by 661

TimeDelay-ARACNE: reverse engineering of gene networks from time-course data by an information theoretic approach

Zoppoli, P., Morganella, S., & Ceccarelli, M. (2010) · BMC Bioinformatics

Gene Regulatory Network AnalysisBioinformatics and Genomic Networks

Cited by 248

Integrative multi-omic cancer profiling reveals DNA methylation patterns associated with therapeutic vulnerability and cell-of-origin

Liang, W.-W., Lu, R. J.-H., Jayasinghe, R. G., Foltz, S. M., Porta-Pardo, E., Geffen, Y., Wendl, M. C., Lazcano, R., Kolodziejczak, I., Song, Y., et al. (2023) · Cancer Cell

Epigenetics and DNA MethylationCancer Genomics and Diagnostics

Cited by 105

Gene expression profiling at early organogenesis reveals both common and diverse mechanisms in foregut patterning

Fagman, H., Amendola, E., Parrillo, L., Zoppoli, P., Marotta, P., Scarfò, M., De Luca, P., de Carvalho, D. P., Ceccarelli, M., De Felice, M., et al. (2011) · Developmental Biology

Developmental Biology and Gene RegulationRenal and related cancers

Cited by 67

Pathways affected by 3,5-diiodo- l -thyronine in liver of high fat-fed rats: Evidence from two-dimensional electrophoresis, blue-native PAGE, and mass spectrometry

Silvestri, E., Cioffi, F., Glinni, D., Ceccarelli, M., Lombardi, A., de Lange, P., Chambery, A., Severino, V., Lanni, A., Goglia, F., et al. (2010) · Molecular BioSystems

Adipose Tissue and MetabolismMitochondrial Function and Pathology

Cited by 34