Sirelkhatim, Hassan

Nucleotide Transformer: building and evaluating robust foundation models for human genomics

Dalla-Torre, H., Gonzalez, L., Mendoza-Revilla, J., Lopez Carranza, N., Grzywaczewski, A. H., Oteri, F., Dallago, C., Trop, E., de Almeida, B. P., Sirelkhatim, H., et al. (2025) · Nature Methods

Machine Learning in BioinformaticsGenetic Associations and Epidemiology

Cited by 772

The Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

Lopez, M., Dalla-Torre, H., Gonzalez, L., Mendoza-Revilla, J., Carranza, N. L., Grzywaczewski, A., Oteri, F., Dallago, C., Trop, E., Sirelkhatim, H., et al. (2023) · Nature Methods

Machine Learning in BioinformaticsGenomics and Phylogenetic Studies

Cited by 680

The Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

Dalla-Torre, H., Gonzalez, L., Mendoza Revilla, J., Lopez Carranza, N., Henryk Grywaczewski, A., Oteri, F., Dallago, C., Trop, E., De Almeida, B. P., Sirelkhatim, H., et al. (2023) · Nature Methods

Machine Learning in BioinformaticsGenomics and Phylogenetic Studies

Cited by 680

GPU-accelerated homology search with MMseqs2

Kallenborn, F., Chacon, A., Hundt, C., Sirelkhatim, H., Didi, K., Cha, S., Dallago, C., Mirdita, M., Schmidt, B., & Steinegger, M. (2024) · Nature Methods

Protein Structure and DynamicsParallel Computing and Optimization Techniques

Cited by 72