Koopmans, Frank

SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse

Koopmans, F., van Nierop, P., Andres-Alonso, M., Byrnes, A., Cijsouw, T., Coba, M. P., Cornelisse, L. N., Farrell, R. J., Goldschmidt, H. L., Howrigan, D. P., et al. (2019) · Neuron

Biomedical Text Mining and OntologiesBioinformatics and Genomic Networks

Cited by 938

Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells

Gupta, I., Collier, P. G., Haase, B., Mahfouz, A., Joglekar, A., Floyd, T., Koopmans, F., Barres, B., Smit, A. B., Sloan, S. A., et al. (2018) · Nature Biotechnology

Single-cell and spatial transcriptomicsRNA Research and Splicing

Cited by 343

Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue

Hardwick, S. A., Hu, W., Joglekar, A., Fan, L., Collier, P. G., Foord, C., Balacco, J., Lanjewar, S., Sampson, M. M., Koopmans, F., et al. (2022) · Nature Biotechnology

Single-cell and spatial transcriptomicsRNA Research and Splicing

Cited by 119

Correlation profiling of brain sub-cellular proteomes reveals co-assembly of synaptic proteins and subcellular distribution

Pandya, N. J., Koopmans, F., Slotman, J. A., Paliukhovich, I., Houtsmuller, A. B., Smit, A. B., & Li, K. W. (2017) · Scientific Reports

Neuroscience and Neuropharmacology ResearchAdvanced Proteomics Techniques and Applications

Cited by 55

Systematic assessment of variability in the proteome of iPSC derivatives

Beekhuis-Hoekstra, S. D., Watanabe, K., Werme, J., de Leeuw, C. A., Paliukhovich, I., Li, K. W., Koopmans, F., Smit, A. B., Posthuma, D., & Heine, V. M. (2021) · Stem Cell Research

Pluripotent Stem Cells ResearchAdvanced Proteomics Techniques and Applications

Cited by 23

RIM and MUNC13 membrane–binding domains are essential for neuropeptide secretion

Murphy, F. H., Abramian, A., Klaassen, R. V., Koopmans, F., Persoon, C. M., Smit, A. B., Toonen, R. F., & Verhage, M. (2025) · Journal of Cell Biology

Cellular transport and secretionNeuroscience and Neuropharmacology Research

Cited by 3