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Molecular and clinical characterization of 25 individuals with exonic deletions of NRXN1 and comprehensive review of the literature
Open accessAbstract
This study aimed to elucidate the observed variable phenotypic expressivity associated with NRXN1 (Neurexin 1) haploinsufficiency by analyses of the largest cohort of patients with NRXN1 exonic deletions described to date and by comprehensively reviewing all comparable copy number variants in all disease cohorts that have been published in the peer reviewed literature (30 separate papers in all). Assessment of the clinical details in 25 previously undescribed individuals with NRXN1 exonic deletions demonstrated recurrent phenotypic features consisting of moderate to severe intellectual disability (91%), severe language delay (81%), autism spectrum disorder (65%), seizures (43%), and hypotonia (38%). These showed considerable overlap with previously reported NRXN1 ‐deletion associated phenotypes in terms of both spectrum and frequency. However, we did not find evidence for an association between deletions involving the β‐isoform of neurexin‐1 and increased head size, as was recently published in four cases with a deletion involving the C‐terminus of NRXN1 . We identified additional rare copy number variants in 20% of cases. This study supports a pathogenic role for heterozygous exonic deletions of NRXN1 in neurodevelopmental disorders. The additional rare copy number variants identified may act as possible phenotypic modifiers as suggested in a recent digenic model of neurodevelopmental disorders. © 2013 Wiley Periodicals, Inc.
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“De novo CNVs are observed in 5%–10% of screened ASD-affected individuals, and after further follow-up studies, some of them have proven to alter high-risk genes (e.g., NRXN112 [MIM 600565]).”
From Convergence of genes and cellular pathways dysregulated in autism spectrum disorders (2014) · cites this paper as [12]
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Cites
Structural Variation of Chromosomes in Autism Spectrum Disorder
Marshall, C. R., Noor, A., Vincent, J. B., Lionel, A. C., Feuk, L., Skaug, J., Shago, M., Moessner, R., Pinto, D., Ren, Y., et al. (2008) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2007.12.009 · Cited by 1,815 · cited 3×
“In addition, several groups have implicated NRXN1 disruption [Kim et al., 2008], point mutations [Marshall et al., 2008; Shah et al., 2010] and genomic deletions in mental retardation (and over-lapping neurodevelopmental phenotypes) [Zahir et al., 2008; Guilmatre et al., 2009; Ching et al., 2010;…”
Rare chromosomal deletions and duplications increase risk of schizophrenia
The International Schizophrenia Consortium (2008) · Nature · doi:10.1038/nature07239 · Cited by 1,475
Autism genome-wide copy number variation reveals ubiquitin and neuronal genes
Glessner, J. T., Wang, K., Cai, G., Korvatska, O., Kim, C. E., Wood, S., Zhang, H., Estes, A., Brune, C. W., Bradfield, J. P., et al. (2009) · Nature · doi:10.1038/nature07953 · Cited by 1,421
Mapping autism risk loci using genetic linkage and chromosomal rearrangements
The Autism Genome Project Consortium (2007) · Nature Genetics · doi:10.1038/ng1985 · Cited by 1,402
A copy number variation morbidity map of developmental delay
Cooper, G. M., Coe, B. P., Girirajan, S., Rosenfeld, J. A., Vu, T. H., Baker, C., Williams, C., Stalker, H., Hamid, R., Hannig, V., et al. (2011) · Nature Genetics · doi:10.1038/ng.909 · Cited by 1,351
Sanders, S. J., Ercan-Sencicek, A. G., Hus, V., Luo, R., Murtha, M. T., Moreno-De-Luca, D., Chu, S. H., Moreau, M. P., Gupta, A. R., Thomson, S. A., et al. (2011) · Neuron · doi:10.1016/j.neuron.2011.05.002 · Cited by 1,263
CNVs: Harbingers of a Rare Variant Revolution in Psychiatric Genetics
Malhotra, D., & Sebat, J. (2012) · Cell · doi:10.1016/j.cell.2012.02.039 · Cited by 854
A recurrent 16p12.1 microdeletion supports a two-hit model for severe developmental delay
Girirajan, S., Rosenfeld, J. A., Cooper, G. M., Antonacci, F., Siswara, P., Itsara, A., Vives, L., Walsh, T., McCarthy, S. E., Baker, C., et al. (2010) · Nature Genetics · doi:10.1038/ng.534 · Cited by 667
Disruption of neurexin 1 associated with autism spectrum disorder
Kim, H.-G., Kishikawa, S., Higgins, A. W., Seong, I.-S., Donovan, D. J., Shen, Y., Lally, E., Weiss, L. A., Najm, J., Kutsche, K., et al. (2008) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2007.09.011 · Cited by 578
Disruption of the neurexin 1 gene is associated with schizophrenia
Rujescu, D., Ingason, A., Cichon, S., Pietiläinen, O. P. H., Barnes, M. R., Toulopoulou, T., Picchioni, M., Vassos, E., Ettinger, U., Bramon, E., et al. (2009) · Human Molecular Genetics · doi:10.1093/hmg/ddn351 · Cited by 471
Ullrich, B., Ushkaryov, Y. A., & Südhof, T. C. (1995) · Neuron · doi:10.1016/0896-6273(95)90306-2 · Cited by 460
A Genome-Wide Investigation of SNPs and CNVs in Schizophrenia
Need, A. C., Ge, D., Weale, M. E., Maia, J. M., Feng, S., Heinzen, E. L., Shianna, K. V., Yoon, W., Kasperavičiūtė, D., Gennarelli, M., et al. (2009) · PLoS Genetics · doi:10.1371/journal.pgen.1000373 · Cited by 454
Levinson, D. F., Duan, J., Oh, S., Wang, K., Sanders, A. R., Shi, J., Zhang, N., Mowry, B. J., Olincy, A., Amin, F., et al. (2011) · American Journal of Psychiatry · doi:10.1176/appi.ajp.2010.10060876 · Cited by 434
Guilmatre, A., Dubourg, C., Mosca, A.-L., Legallic, S., Goldenberg, A., Drouin-Garraud, V., Layet, V., Rosier, A., Briault, S., Bonnet-Brilhault, F., et al. (2009) · Archives of General Psychiatry · doi:10.1001/archgenpsychiatry.2009.80 · Cited by 429
Bucan, M., Abrahams, B. S., Wang, K., Glessner, J. T., Herman, E. I., Sonnenblick, L. I., Alvarez Retuerto, A. I., Imielinski, M., Hadley, D., Bradfield, J. P., et al. (2009) · PLoS Genetics · doi:10.1371/journal.pgen.1000536 · Cited by 424
Menten, B., Maas, N., Thienpont, B., Buysse, K., Vandesompele, J., Melotte, C., de Ravel, T. J. L., Vooren, S. V., Balikova, I., Backx, L., et al. (2006) · Journal of Medical Genetics · doi:10.1136/jmg.2005.039453 · Cited by 420
Comparative genome hybridization suggests a role for NRXN1 and APBA2 in schizophrenia
Kirov, G., Gumus, D., Chen, W., Norton, N., Georgieva, L., Sari, M., O'Donovan, M. C., Erdogan, F., Owen, M. J., Ropers, H.-H., et al. (2007) · Human Molecular Genetics · doi:10.1093/hmg/ddm323 · Cited by 377
Neurexins: three genes and 1001 products.
Missler, M., & Südhof, T. (1998) · Trends in Genetics · doi:10.1016/s0168-9525(97)01324-3 · Cited by 376
Zweier, C., de Jong, E. K., Zweier, M., Orrico, A., Ousager, L. B., Collins, A. L., Bijlsma, E. K., Oortveld, M. A. W., Ekici, A. B., Reis, A., et al. (2009) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2009.10.004 · Cited by 345
Deletions of NRXN1 (neurexin‐1) predispose to a wide spectrum of developmental disorders
Ching, M. S. L., Shen, Y., Tan, W., Jeste, S., Morrow, E. M., Chen, X., Mukaddes, N. M., Yoo, S.-Y., Hanson, E. M., Hundley, R. J., et al. (2010) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.31063 · Cited by 306
Truncating mutations in NRXN2 and NRXN1 in autism spectrum disorders and schizophrenia
Gauthier, J., Siddiqui, T. J., Huashan, P., Yokomaku, D., Hamdan, F. F., Champagne, N., Lapointe, M., Spiegelman, D., Noreau, A., Lafrenière, R. G., et al. (2011) · Human Genetics · doi:10.1007/s00439-011-0975-z · Cited by 286
High frequency of neurexin 1β signal peptide structural variants in patients with autism
Feng, J., Schroer, R. J., Jin, Y., Song, W., Yang, C., Bockholt, A., Cook, E. H., Skinner, C. D., Schwartz, C. E., & Sommer, S. S. (2006) · Neuroscience Letters · doi:10.1016/j.neulet.2006.08.017 · Cited by 285
Recurrent CNVs Disrupt Three Candidate Genes in Schizophrenia Patients
Vrijenhoek, T., Buizer‐Voskamp, J. E., van der Stelt, I., Strengman, E., Sabatti, C., van Kessel, A. G., Brunner, H. G., Ophoff, R. A., & Veltman, J. A. (2008) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2008.09.011 · Cited by 275
Direct Measure of the De Novo Mutation Rate in Autism and Schizophrenia Cohorts
Awadalla, P., Gauthier, J., Myers, R. A., Casals, F., Hamdan, F. F., Griffing, A. R., Côté, M., Henrion, É., Spiegelman, D., Tarabeux, J., et al. (2010) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2010.07.019 · Cited by 243
Rare Deletions at the Neurexin 3 Locus in Autism Spectrum Disorder
Vaags, A. K., Lionel, A. C., Sato, D., Goodenberger, M. L., Stein, Q., Curran, S. R., Ogilvie, C. M., Ahn, J. W., Drmic, I., Senman, L., et al. (2011) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2011.11.025 · Cited by 217
Copy number variations in neurodevelopmental disorders
Grayton, H. M., Fernandes, C., Rujescu, D., & Collier, D. A. (2012) · Progress in Neurobiology · doi:10.1016/j.pneurobio.2012.07.005 · Cited by 217
A Discovery Resource of Rare Copy Number Variations in Individuals with Autism Spectrum Disorder
Prasad, A., Merico, D., Thiruvahindrapuram, B., Wei, J., Lionel, A. C., Sato, D., Rickaby, J., Lu, C., Szatmari, P., Roberts, W., et al. (2012) · G3 Genes|Genomes|Genetics · doi:10.1534/g3.112.004689 · Cited by 206
The clinical context of copy number variation in the human genome
Lee, C., & Scherer, S. W. (2010) · Expert Reviews in Molecular Medicine · doi:10.1017/s1462399410001390 · Cited by 188
Analysis of the Human Neurexin Genes: Alternative Splicing and the Generation of Protein Diversity
Rowen, L., Young, J. M., Birditt, B., Kaur, A., Madan, A., Philipps, D. L., Qin, S., Minx, P. J., Wilson, R. K., Hood, L., et al. (2002) · Genomics · doi:10.1006/geno.2002.6734 · Cited by 184
Penetrance for copy number variants associated with schizophrenia
Vassos, E., Collier, D. A., Holden, S., Patch, C., Rujescu, D., St Clair, D., & Lewis, C. M. (2010) · Human Molecular Genetics · doi:10.1093/hmg/ddq259 · Cited by 182
A patient with vertebral, cognitive and behavioural abnormalities and a de novo deletion of NRXN1α
Zahir, F., Baross, Á., Delaney, A. D., Eydoux, P., Fernandes, N., Pugh, T. J., Marra, M. A., & Friedman, J. M. (2007) · Journal of Medical Genetics · doi:10.1136/jmg.2007.054437 · Cited by 138
Phenotypic spectrum and genotype–phenotype correlations of NRXN1 exon deletions
Schaaf, C. P., Boone, P. M., Sampath, S., Williams, C. A., Bader, P. I., Mueller, J. M., Shchelochkov, O. A., Brown, C., Crawford, H. P., Phalen, J. A., et al. (2012) · European Journal of Human Genetics · doi:10.1038/ejhg.2012.95 · Cited by 127
Expanding the clinical spectrum associated with defects in CNTNAP2 and NRXN1
Gregor, A., Albrecht, B., Bader, I., Bijlsma, E. K., Ekici, A. B., Engels, H., Hackmann, K., Horn, D., Hoyer, J., Klapecki, J., et al. (2011) · BMC Medical Genetics · doi:10.1186/1471-2350-12-106 · Cited by 121
Sahoo, T., Theisen, A., Rosenfeld, J. A., Lamb, A. N., Ravnan, J. B., Schultz, R. A., Torchia, B. S., Neill, N., Casci, I., Bejjani, B. A., et al. (2011) · Genetics in Medicine · doi:10.1097/gim.0b013e3182217a06 · Cited by 115
De Novo Rates and Selection of Schizophrenia-Associated Copy Number Variants
Rees, E., Moskvina, V., Owen, M. J., O'Donovan, M. C., & Kirov, G. (2011) · Biological Psychiatry · doi:10.1016/j.biopsych.2011.07.011 · Cited by 94
New Copy Number Variations in Schizophrenia
Magri, C., Sacchetti, E., Traversa, M., Valsecchi, P., Gardella, R., Bonvicini, C., Minelli, A., Gennarelli, M., & Barlati, S. (2010) · PLoS ONE · doi:10.1371/journal.pone.0013422 · Cited by 86
Wiśniowiecka‐Kowalnik, B., Nesteruk, M., Peters, S. U., Xia, Z., Cooper, M. L., Savage, S., Amato, R. S., Bader, P., Browning, M. F., Haun, C. L., et al. (2010) · American Journal of Medical Genetics Part B: Neuropsychiatric Genetics · doi:10.1002/ajmg.b.31064 · Cited by 82
Harrison, V., Connell, L., Hayesmoore, J. B. G., McParland, J., Pike, M. G., & Blair, E. M. (2011) · American Journal of Medical Genetics Part A · doi:10.1002/ajmg.a.34255 · Cited by 81
Duong, L., Klitten, L. L., Møller, R. S., Ingason, A., Jakobsen, K. D., Skjødt, C., Didriksen, M., Hjalgrim, H., Werge, T. M., & Tommerup, N. (2012) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.32036 · Cited by 77
Fu, Y., & Huang, Z. J. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1011233108 · Cited by 70
Exon‐disrupting deletions of NRXN1 in idiopathic generalized epilepsy
Møller, R. S., Weber, Y. G., Klitten, L. L., Trucks, H., Muhle, H., Kunz, W. S., Mefford, H. C., Franke, A., Kautza, M., Wolf, P., et al. (2013) · Epilepsia · doi:10.1111/epi.12078 · Cited by 69
Stewart, L. R., Hall, A. L., Kang, S.-H. L., Shaw, C. A., & Beaudet, A. L. (2011) · BMC Medical Genetics · doi:10.1186/1471-2350-12-154 · Cited by 67
Genomic Copy Number Analysis in Alzheimer′s Disease and Mild Cognitive Impairment: An ADNI Study
Swaminathan, S., Kim, S., Shen, L., Risacher, S. L., Foroud, T., Pankratz, N., Potkin, S. G., Huentelman, M. J., Craig, D. W., Weiner, M. W., et al. (2011) · International Journal of Alzheimer s Disease · doi:10.4061/2011/729478 · Cited by 66
Genome-Wide Association Study of Multiplex Schizophrenia Pedigrees
Levinson, D. F., Shi, J., Wang, K., Oh, S., Riley, B. P., Pulver, A. E., Wildenauer, D. B., Laurent‐Levinson, C., Mowry, B. J., Gejman, P. V., et al. (2012) · American Journal of Psychiatry · doi:10.1176/appi.ajp.2012.11091423 · Cited by 63
Hotspots of Large Rare Deletions in the Human Genome
Bradley, W. E. C., Raelson, J., Dubois, D. Y., Godin, É., Fournier, H., Privé, C., Allard, R., Pinchuk, V., Lapalme, M., Paulussen, R. J. A., et al. (2010) · PLoS ONE · doi:10.1371/journal.pone.0009401 · Cited by 57
Evidence of novel fine-scale structural variation at autism spectrum disorder candidate loci
Hedges, D. J., Hamilton‐Nelson, K. L., Sacharow, S. J., Nations, L. D., Beecham, G. W., Kozhekbaeva, Z. M., Butler, B., Cukier, H. N., Whitehead, P. L., Ma, D., et al. (2012) · Molecular Autism · doi:10.1186/2040-2392-3-2 · Cited by 50
Epilepsy with cognitive deficit and autism spectrum disorders: Prospective diagnosis by array CGH
Nicholl, J. K., Waters, W., Suwalski, S., Brown, S., Hull, Y., Harbord, M. G., Entwistle, J., Thompson, S. C., Clark, D., Pridmore, C., et al. (2012) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.32114 · Cited by 23
Rare NRXN1 promoter variants in patients with schizophrenia
Shah, A., Tioleco, N., Nolan, K. A., Locker, J. D., Groh, K., Villa, C., Stopková, P., Pedrosa, E., & Lachman, H. M. (2010) · Neuroscience Letters · doi:10.1016/j.neulet.2010.03.047 · Cited by 20
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Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
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Excitatory/Inhibitory Balance and Circuit Homeostasis in Autism Spectrum Disorders
Nelson, S. B., & Valakh, V. (2015) · Neuron · doi:10.1016/j.neuron.2015.07.033 · Cited by 1,001
Excess of rare, inherited truncating mutations in autism
Krumm, N., Turner, T. N., Baker, C., Vives, L., Mohajeri, K., Witherspoon, K., Raja, A., Coe, B. P., Stessman, H. A., He, Z.-X., et al. (2015) · Nature Genetics · doi:10.1038/ng.3303 · Cited by 587
Persico, A. M., & Napolioni, V. (2013) · Behavioural Brain Research · doi:10.1016/j.bbr.2013.06.012 · Cited by 258
Genetics and epigenetics of autism spectrum disorder—current evidence in the field
Wiśniowiecka‐Kowalnik, B., & Nowakowska, B. (2019) · Journal of Applied Genetics · doi:10.1007/s13353-018-00480-w · Cited by 249
Metadata
- Authors
- Béna, F., Bruno, D. L., Eriksson, M., van Ravenswaaij‐Arts, C., Stark, Z., Dijkhuizen, T., Gerkes, E., Gimelli, S., Ganesamoorthy, D., Thuresson, A. C., Labalme, A., Till, M., Bilan, F., Pasquier, L., Kitzis, A., Dubourgm, C., Rossi, M., Bottani, A., Gagnebin, M., Sanlaville, D., Gilbert‐Dussardier, B., Guipponi, M., van Haeringen, A., Kriek, M., Ruivenkamp, C., Antonarakis, S. E., Anderlid, B. M., Slater, H. R., & Schoumans, J.
- Affiliations
- Royal Children's Hospital (AU)
- Karolinska Institutet (SE)
- University Medical Center Groningen (NL)
- University Hospital of Geneva (CH)
- Uppsala University (SE)
- Hospices Civils de Lyon (FR)
- Université de Poitiers (FR)
- Centre Hospitalier Universitaire de Rennes (FR)
- Lyon 1 Université (FR)
- Leiden University Medical Center (NL)
- University of Geneva (CH)
- Centre Hospitalier Universitaire Vaudois (CH)
- Corresponding author
- Schoumans, Jacqueline
- ORCID
- Venue
- American Journal of Medical Genetics Part B: Neuropsychiatric Genetics
- Publisher
- Wiley
- Published
- 2013-03-26
- Volume
- 162
- Issue
- 4
- Pages
- 388-403
- ISSN
- 1552-4841 (ISSN-L)
- 1552-485X
- OpenAlex
- W2053952465
- Cited by
- 109
- References
- 49
- Citations by year
- 2026: 3 · 2025: 6 · 2024: 8 · 2023: 4 · 2022: 8 · 2021: 7 · 2020: 7 · 2019: 10 · 2018: 6 · 2017: 5 · 2016: 7 · 2015: 15 · 2014: 18 · 2013: 5
- FWCI
- 1.84
- Type
- journal article
- Language
- en
- Open access
- green
- research.rug.nl
- Licence
- Locations
- American Journal of Medical Genetics Part B Neuropsychiatric Genetics (publishedVersion)
- PubMed (publishedVersion)
- SERVAL (Université de Lausanne) (acceptedVersion)
- Archive ouverte UNIGE (University of Geneva) (acceptedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion)
- HAL (submittedVersion)
- Leiden Repository (Leiden University) (submittedVersion)
- IRIS (submittedVersion)
- University of Groningen research database (University of Groningen / Centre for Information Technology) (submittedVersion, other-oa)
- Archive ouverte UNIGE (University of Geneva) (submittedVersion, cc-by)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomic variations and chromosomal abnormalities
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomics and Rare Diseases
- Keywords
- NRXN1, exon deletion, haploinsufficiency, copy number variation, intellectual disability, language delay, autism spectrum disorder, seizures, hypotonia, phenotypic variability, neurodevelopmental disorders, head size
- MeSH terms
- Autistic Disorder, Calcium-Binding Proteins, Exons, Heterozygote, Humans, Karyotyping, Nerve Tissue Proteins, Seizures, Cohort Studies, Cell Adhesion Molecules, Neuronal, Sequence Deletion, Neural Cell Adhesion Molecules
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