Computational studies on the functional and structural impact of pathogenic mutations in enzymes
Open accessPublished version of a preprint
Abstract
Enzymes are critical biological catalysts involved in maintaining the intricate balance of metabolic processes within living organisms. Mutations in enzymes can result in disruptions to their functionality that may lead to a range of diseases. This review focuses on computational studies that investigate the effects of disease‐associated mutations in various enzymes. Through molecular dynamics simulations, multiscale calculations, and machine learning approaches, computational studies provide detailed insights into how mutations impact enzyme structure, dynamics, and catalytic activity. This review emphasizes the increasing impact of computational simulations in understanding molecular mechanisms behind enzyme (dis)function by highlighting the application of key computational methodologies to selected enzyme examples, aiding in the prediction of mutation effects and the development of therapeutic strategies.
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- Authors
- Dissanayake, U. C., Roy, A., Maghsoud, Y., Polara, S., Debnath, T., & Cisneros, G. A.
- Affiliations
- The University of Texas at Dallas (US)
- Corresponding author
- Cisneros, G. Andrés
- Venue
- Protein Science
- Publisher
- Wiley
- Published
- 2025-03-21
- Volume
- 34
- Issue
- 4
- Pages
- e70081-e70081
- ISSN
- 0961-8368 (ISSN-L)
- 1469-896X
- OpenAlex
- W4408745382
- Cited by
- 8
- References
- 6
- Citations by year
- 2026: 5 · 2025: 3
- FWCI
- 0.70
- Type
- journal article
- Language
- en
- Open access
- green
- doi.org
- Licence
- Locations
- Protein Science (publishedVersion)
- ChemRxiv (acceptedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- PubMed Central (publishedVersion)
- Funders
- National Institutes of Health (R35GM15195)
- National Science Foundation (ACCESS BIO240365, OAC‐2117247)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
- Physical Sciences › Materials Science › Materials Chemistry › Enzyme Structure and Function
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomics and Rare Diseases
- Keywords
- enzyme mutations, disease-associated mutations, enzyme dysfunction, catalytic activity, molecular dynamics simulation, multiscale modeling
- MeSH terms
- Machine Learning, Enzymes, Humans, Mutation, Protein Conformation, Computational Biology, Molecular Dynamics Simulation
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