Antibody modeling assessment

Almagro, Juan C., Beavers, Mary Pat, Hernandez‐Guzman, Francisco, Maier, Johannes, Shaulsky, Jodi, Butenhof, Kenneth, Labute, Paul, Thorsteinson, Nels +5 more·2011·Proteins: Structure, Function, and Bioinformatics
DOI 10.1002/prot.23130

Cited by (130)

Items 101–130 of 130

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  3. Bioinformatics Tools for Analysis of Antibodies
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  4. Computational Modeling of Antibody and T-Cell Receptor (CDR3 Loops)
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  5. Structure-Based Optimization of Antibody-Based Biotherapeutics for Improved Developability: A Practical Guide for Molecular Modelers
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  6. Antibody Humanization by a Single Cycle of CDR-Grafting
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  7. Clonidine inhibits anti‐non‐Gal IgM xenoantibody elicited in multiple pig‐to‐primate models
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  8. Novel Approaches in Discovery and Design of Antibody-Based Therapeutics
    Juan Carlos Almagro, Sreekumar R. Kodangattil · 2015 · Elsevier eBooks
  9. Best Practices in Assessing the Developability of Biopharmaceutical Candidates
    Juan Carlos Almagro, Alessandro Mascioni · 2015 · CRC Press eBooks
  10. Humanization Strategies
    José W. Saldanha · 2014
  11. Variable chain engineering – humanization and optimization approaches
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  12. Antibodies engineering by computational approach
    Mujahed I. Mustafa · 2022 · Multidisciplinary Reviews
  13. Antibody loop modelling on a quantum computer
    Jonathan Allcock, Anna Vangone, Agnes Meyder, Stanisław Adaszewski, Martin Strahm, Chang‐Yu Hsieh, Shengyu Zhang · 2021 · arXiv (Cornell University)
  14. References
    2012 · Elsevier eBooks
  15. H3-OPT: Accurate prediction of CDR-H3 loop structures of antibodies with deep learning
    Chen, Hedi, Fan, Xiaoyu, Zhu, Shuqian, Pei, Yuchan, Zhang, Xiaochun, Zhang, Xiaonan, Liu, Lihang, Qian, Feng, Tian, Boxue · 2023
  16. H3-OPT: Accurate prediction of CDR-H3 loop structures of antibodies with deep learning
    Hedi Chen, Xiaoyu Fan, Shuqian Zhu, Yuchan Pei, Xiaochun Zhang, Xiaonan Zhang, Lihang Liu, Feng Qian, Boxue Tian · 2024 · eLife
  17. A deeper analysis of the epitope/paratope of PLY-5, a mouse monoclonal antibody which recognises the conserved undecapeptide tryptophan-rich loop (ECTGLAWEWWR) of bacterial cholesterol-dependent cytolysins
    Pedro González‐Menéndez, Marcos García-Ocaña, Juan R. de los Toyos · 2012 · Biochemical and Biophysical Research Communications
  18. Aplicações de química teórica no estudo de materiais: métodos in silico para nanomateriais
    Luiz Carlos Gomide Freitas, Guedmiller S. Oliveira · 2018
  19. Desenvolvimento de nanodispositivos baseados em biomoléculas: abordagens computacionais
    Eduardo de Faria Franca, Guedmiller S. Oliveira, Jéssica Cristiane Magalhães Ierich, Ana Carolina Araujo Vig, Caroline P. Brandini, Ariana de Souza Moraes, Fábio L. Leite · 2018
  20. Structural dynamics and modeling of curcin protein: docking against pterin derivatives
    Hemalatha Palanivel, Murugesh Easwaran, Arun Meena, Suryanarayanan Chandrasekaran, M. Abdul Kader, Adhigan Murali · 2019 · SN Applied Sciences
  21. Predictive QSAR tools to aid in early process development of monoclonal antibodies
    John Micael Andreas Karlberg · 2019
  22. Designing a new bi-specific tandem single-chain variable fragment antibody against tumor necrosis factor-α and interleukin-23 via in silico studies for the treatment of Rheumatoid arthritis
    Asgar Barkhordaria, Karim Mahnam, M. Hamid · 2020
  23. Faculty Opinions recommendation of Structural diversity in a human antibody germline library.
    Yasmina Noubia Abdiche · 2019 · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
  24. Modeling of Antibody and T-Cell Receptor Structures
    Kamilla Kjærgaard Jensen, Anna Chailyan, Davide Cirillo, Anna Luna Tramontano, Paolo Marcatili · 2018 · Springer eBooks
  25. Biological Activities of Essential Oil of Vitex altissima Leaves and Inhibition Potential towards Phosphoinositide-3 Kinase (PI3K) Enzyme by Molecular Docking
    Sunitha S., Ammini Naduvanthar Anoopkumar, Embalil Mathachan Aneesh, K. Rajesh, G. Rathika Nath · 2022 · Asian Journal of Chemistry
  26. H3-OPT: Accurate prediction of CDR-H3 loop structures of antibodies with deep learning
    Hedi Chen, Xiaoyu Fan, Shuqian Zhu, Yuchan Pei, Xiaochun Zhang, Xiaonan Zhang, Lihang Liu, Feng Qian, Boxue Tian · 2023 · eLife
  27. H3-OPT: Accurate prediction of CDR-H3 loop structures of antibodies with deep learning
    Hedi Chen, Xiaoyu Fan, Shuqian Zhu, Yuchan Pei, Xiaochun Zhang, Xiaonan Zhang, Lihang Liu, Feng Qian, Boxue Tian · 2024 · eLife
  28. Integrating deep learning with physics based modeling enables high precision antibody antigen interface prediction
    Kanchanok Kodchakorn, Piyachat Udomwong, Thanathat Pamonsupornwichit, Thanyaluck Phitak, Chatchai Tayapiwatana · 2026 · Scientific Reports
  29. A docking-based method for in silico epitope determination
    Shifa Tahir · 2018 · theses.fr (ABES)
  30. Anticorps catalytiques et répertoires immuns murins : analyse génétique, biochimique et bio-informatique
    Nancy Chaaya · 2019