The DOI matches its Crossref record; 101 of the 101 references it cites were found in a registry or an index.
Integrating Molecular Docking and Molecular Dynamics Simulations
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Citations
Cites
VMD: visual molecular dynamics
Humphrey, W., Dalke, A., & Schulten, K. (1996) · Journal of Molecular Graphics · doi:10.1016/0263-7855(96)00018-5 · Cited by 66,952
UCSF Chimera—A visualization system for exploratory research and analysis
Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., & Ferrin, T. E. (2004) · Journal of Computational Chemistry · doi:10.1002/jcc.20084 · Cited by 45,828
Comparison of simple potential functions for simulating liquid water
Jorgensen, W. L., Chandrasekhar, J., Madura, J. D., Impey, R. W., & Klein, M. L. (1983) · The Journal of Chemical Physics · doi:10.1063/1.445869 · Cited by 41,298
Berman, H. M. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.1.235 · Cited by 40,196
Trott, O., & Olson, A. J. (2010) · Journal of Computational Chemistry · doi:10.1002/jcc.21334 · Cited by 38,412
Development and testing of a general amber force field
Wang, J., Wolf, R. M., Caldwell, J. W., Kollman, P. A., & Case, D. A. (2004) · Journal of Computational Chemistry · doi:10.1002/jcc.20035 · Cited by 19,506
GROMACS: Fast, flexible, and free
Van Der Spoel, D., Lindahl, E., Hess, B., Groenhof, G., Mark, A. E., & Berendsen, H. J. C. (2005) · Journal of Computational Chemistry · doi:10.1002/jcc.20291 · Cited by 19,182
The PyMOL Molecular Graphics System
DeLano, W. L. (2002) · Medical Entomology and Zoology · Cited by 18,147
Lipinski, C. A., Lombardo, F., Dominy, B. W., & Feeney, P. J. (2001) · Advanced Drug Delivery Reviews · doi:10.1016/s0169-409x(00)00129-0 · Cited by 18,139
Jorgensen, W. L., Maxwell, D. S., & Tirado-Rives, J. (1996) · Journal of the American Chemical Society · doi:10.1021/ja9621760 · Cited by 15,409
Cited by
Coarse-Graining the Recognition of a Glycolipid by the C-Type Lectin Mincle Receptor
Noriega, M., Corey, R. A., Haanappel, E., Demange, P., Czaplicki, G., Atkinson, R. A., & Chavent, M. (2024) · The Journal of Physical Chemistry B · doi:10.1021/acs.jpcb.4c03242 · Cited by 2
Porokhin, V., Brown, A. M., & Hassoun, S. (2025) · Journal of Computer-Aided Molecular Design · doi:10.1007/s10822-025-00613-4 · Cited by 1
Metadata
- Authors
- Santos, L. H. S., Ferreira, R. S., & Caffarena, E. R.
- Venue
- Methods in Molecular Biology
- Publisher
- Springer New York
- Published
- 2019
- Volume
- 2053
- Pages
- 13-34
- ISSN
- 1064-3745 (ISSN-L)
- 1940-6029
- OpenAlex
- W2970628659
- Cited by
- 285
- References
- 101
- FWCI
- 35.13
- Type
- book chapter
- Language
- en
- Open access
- closed
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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How to cite
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- CoChat. (2026). Citation check: Integrating Molecular Docking and Molecular Dynamics Simulations. https://app.cochat.ai/papers/10.1007/978-1-4939-9752-7_2
- The paper
- Santos, L. H. S., Ferreira, R. S., & Caffarena, E. R. (2019). Integrating Molecular Docking and Molecular Dynamics Simulations. Methods in Molecular Biology. https://doi.org/10.1007/978-1-4939-9752-7_2
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
