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Analyzing mRNA Localization to the Endoplasmic Reticulum via Cell Fractionation

Jagannathan, Sujatha, Nwosu, Christine, Nicchitta, Christopher V.·2011·Methods in Molecular Biology

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Research works printed but not linked: 19

  1. Stevens, T. J., and Arkin, I. T. (2000) Do more complex organisms have a greater proportion of membrane proteins in their genomes?, Proteins 39, 417– 420. · DOI
  2. Walter, P., Ibrahimi, I., and Blobel, G. (1981) Translocation of proteins across the endoplasmic reticulum. I. Signal recognition protein (SRP) binds to in-vitro-assembled polysomes synthesizing secretory protein, J Cell Biol 91, 545 – 550. · DOI
  3. Walter, P., and Blobel, G. (1981) Translocation of proteins across the endoplasmic reticulum. II. Signal recognition protein (SRP) mediates the selective binding to microsomal ­membranes of in-vitro-assembled polysomes ­synthesizing secretory protein, J Cell Biol 91, 551– 556. · DOI
  4. Walter, P., and Blobel, G. (1981) Translocation of proteins across the endoplasmic reticulum III. Signal recognition protein (SRP) causes signal sequence-dependent and site-specific arrest of chain elongation that is released by microsomal membranes, J Cell Biol 91, 557– 561. · DOI
  5. Lingappa, V. R., and Blobel, G. (1980) Early events in the biosynthesis of secretory and membrane proteins: the signal hypothesis, Recent Prog Horm Res 36, 451– 475.
  6. Lerner, R. S., Seiser, R. M., Zheng, T., Lager, P. J., Reedy, M. C., Keene, J. D., and Nicchitta, C. V. (2003) Partitioning and translation of mRNAs encoding soluble proteins on membrane-bound ribosomes, RNA 9, 1123–1137. · DOI
  7. Diehn, M., Eisen, M. B., Botstein, D., and Brown, P. O. (2000) Large-scale identification of secreted and membrane-associated gene products using DNA microarrays, Nat Genet 25, 58 – 62. · DOI
  8. Mueckler, M. M., and Pitot, H. C. (1981) Structure and function of rat liver polysome populations. I. Complexity, frequency distribution, and degree of uniqueness of free and membrane-bound polysomal polyadenylate-containing RNA populations, J Cell Biol 90, 495 – 506. · DOI
  9. Mutka, S. C., and Walter, P. (2001) Multifaceted physiological response allows yeast to adapt to the loss of the signal recognition particle-dependent protein-targeting pathway, Mol Biol Cell 12, 577– 588. · DOI
  10. Liu, L., Liang, X. H., Uliel, S., Unger, R., Ullu, E., and Michaeli, S. (2002) RNA interference of signal peptide-binding protein SRP54 elicits deleterious effects and protein sorting defects in trypanosomes, J Biol Chem 277, 47348 – 47357. · DOI
  11. Ren, Y. G., Wagner, K. W., Knee, D. A., Aza-Blanc, P., Nasoff, M., and Deveraux, Q. L. (2004) Differential regulation of the TRAIL death receptors DR4 and DR5 by the signal recognition particle, Mol Biol Cell 15, 5064 –5074. · DOI
  12. Pyhtila, B., Zheng, T., Lager, P. J., Keene, J. D., Reedy, M. C., and Nicchitta, C. V. (2008) Signal sequence- and translation-independent mRNA localization to the endoplasmic reticulum, RNA 14, 445 – 453. · DOI
  13. Diehn, M., Bhattacharya, R., Botstein, D., and Brown, P. O. (2006) Genome-scale identification of membrane-associated human mRNAs, PLoS Genet 2, e11. · DOI
  14. Aragon, T., van Anken, E., Pincus, D., Serafimova, I. M., Korennykh, A. V., Rubio, C. A., and Walter, P. (2008) Messenger RNA targeting to endoplasmic reticulum stress signalling sites, Nature. · DOI
  15. Claude, A. (1946) Fractionation of mammalian liver cells by differential centrifugation: II. Experimental procedures and results, Journal of Experimental Medicine 84, 61– 89. · DOI
  16. Duve, C. (1975) Exploring cells with a centrifuge, Science 189, 186 –194. · DOI
  17. Palacios, I. M., and St Johnston, D. (2001) Getting the message across: the intracellular localization of mRNAs in higher eukaryotes, Annu Rev Cell Dev Biol 17, 569– 614. · DOI
  18. Paquin, N., and Chartrand, P. (2008) Local regulation of mRNA translation: new insights from the bud, Trends Cell Biol 18, 105 –111. · DOI
  19. Sambrook J, F. E. F., and Maniatis T (2001) Molecular Cloning: A laboratory manual, Cold Spring Harbor Press, Cold Spring Harbor, New York, USA.

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Metadata

Authors
Jagannathan, S., Nwosu, C., & Nicchitta, C. V.
Venue
Methods in Molecular Biology
Publisher
Humana Press
Published
2011
Pages
301-321
ISSN
  • 1064-3745
  • 1940-6029
Cited by
64
References
0

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