The DOI matches its Crossref record; 248 of the 249 references it cites were found in a registry or an index.
Mechanisms and consequences of intestinal dysbiosis
Open accessAbstract
The composition of the gut microbiota is in constant flow under the influence of factors such as the diet, ingested drugs, the intestinal mucosa, the immune system, and the microbiota itself. Natural variations in the gut microbiota can deteriorate to a state of dysbiosis when stress conditions rapidly decrease microbial diversity and promote the expansion of specific bacterial taxa. The mechanisms underlying intestinal dysbiosis often remain unclear given that combinations of natural variations and stress factors mediate cascades of destabilizing events. Oxidative stress, bacteriophages induction and the secretion of bacterial toxins can trigger rapid shifts among intestinal microbial groups thereby yielding dysbiosis. A multitude of diseases including inflammatory bowel diseases but also metabolic disorders such as obesity and diabetes type II are associated with intestinal dysbiosis. The characterization of the changes leading to intestinal dysbiosis and the identification of the microbial taxa contributing to pathological effects are essential prerequisites to better understand the impact of the microbiota on health and disease.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Regardless of balance, intestinal microbiota affects the functionality of various organs such as brain, liver, pancreas, intestine, and heart (60, 61).”
From Kefir and Intestinal Microbiota Modulation: Implications in Human Health (2021) · cites this paper as [61]
In the citing paper
“In addition, the immune system and the intestinal microbiota play a symbiotic function, maintaining a picture of non-inflammatory homeostasis: in cases of intestinal dysbiosis, there is an activation of the immune system, which leads to changes in the host's immunity.”
From Kefir and Intestinal Microbiota Modulation: Implications in Human Health (2021) · cites this paper as [61]
In the citing paper
“These changes can impair the maturation of the innate immune system or lead to autoimmune diseases, such as type 1 diabetes (61).”
From Kefir and Intestinal Microbiota Modulation: Implications in Human Health (2021) · cites this paper as [61]
Citations
Cites
2 retracted
Gut Microbiota Is a Key Modulator of Insulin Resistance in TLR 2 Knockout Mice
Caricilli, A. M., Picardi, P. K., de Abreu, L. L., Ueno, M., Prada, P. O., Ropelle, E. R., Hirabara, S. M., Castoldi, Â., Moraes‐Vieira, P. M., Câmara, N. O. S., et al. (2011) · PLoS Biology · doi:10.1371/journal.pbio.1001212 · Cited by 285
RetractedInflammatory Bowel Disease as a Risk Factor for Colorectal Cancer
Lukáš, M. (2010) · Digestive Diseases · doi:10.1159/000320276 · Cited by 99
RetractedDermyshi, E., Wang, Y., Yan, C., Hong, W., Qiu, G., Gong, X., & Zhang, T. (2017) · Neonatology · doi:10.1159/000454668 · Cited by 24,586
An obesity-associated gut microbiome with increased capacity for energy harvest
Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R., & Gordon, J. I. (2006) · Nature · doi:10.1038/nature05414 · Cited by 12,444
Human gut microbes associated with obesity
Ley, R. E., Turnbaugh, P. J., Klein, S., & Gordon, J. I. (2006) · Nature · doi:10.1038/4441022a · Cited by 8,785
Enterotypes of the human gut microbiome
MetaHIT Consortium (additional members), Arumugam, M., Raes, J., Pelletier, E., Le Paslier, D., Yamada, T., Mende, D. R., Fernandes, G. R., Tap, J., Bruls, T., et al. (2011) · Nature · doi:10.1038/nature09944 · Cited by 7,548
Changes of Intestinal Functions in Liver Cirrhosis
Fukui, H., & Wiest, R. (2016) · Inflammatory Intestinal Diseases · doi:10.1159/000444436 · Cited by 6,820
Metabolic Endotoxemia Initiates Obesity and Insulin Resistance
Cani, P. D., Amar, J., Iglesias, M. A., Poggi, M., Knauf, C., Bastelica, D., Neyrinck, A. M., Fava, F., Tuohy, K. M., Chabo, C., et al. (2007) · Diabetes · doi:10.2337/db06-1491 · Cited by 6,638
Linking long-term dietary patterns with gut microbial enterotypes
Wu, G. D., Chen, J., Hoffmann, C., Bittinger, K., Chen, Y.-Y., Keilbaugh, S. A., Bewtra, M., Knights, D., Walters, W. A., Knight, R., et al. (2011) · Science · doi:10.1126/science.1208344 · Cited by 6,513
The gut microbiota as an environmental factor that regulates fat storage
Bäckhed, F., Ding, H., Wang, T., Hooper, L. V., Koh, G. Y., Nagy, A., Semenkovich, C. F., & Gordon, J. I. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0407076101 · Cited by 6,245
Cited by
Sorted by citations
Items 701–767 of 767
Pagano, F. S., Bemis, D. H., Rehman, R., Shapiro, J. M., & Belenky, P. A. (2025) · Frontiers in Microbiology · doi:10.3389/fmicb.2025.1629464
Yang, M., Wang, S., Han, Y., Wang, Y., Duan, Z., Yang, C., Huo, X., Wang, J., Xu, S., & Zhao, Y. (2025) · Brain Behavior and Immunity Integrative · doi:10.1016/j.bbii.2025.100147
RetractedEssock-Burns, T., Lawhorn, S., Wu, L., McClosky, S., Moriano‐Gutierrez, S., Ruby, E. G., & McFall‐Ngai, M. (2024) · Figshare · doi:10.6084/m9.figshare.26579492
Essock-Burns, T., Lawhorn, S., Wu, L., McClosky, S., Moriano‐Gutierrez, S., Ruby, E. G., & McFall‐Ngai, M. (2024) · Figshare · doi:10.6084/m9.figshare.26579489
Liu, H., Tian, R., Wang, H., Feng, S., Li, H., Xiao, Y., Luan, X., Zhang, Z., Shi, N., Niu, H., et al. (2020) · Figshare · doi:10.6084/m9.figshare.13076631
Essock-Burns, T., Lawhorn, S., Wu, L., McClosky, S., Moriano‐Gutierrez, S., Ruby, E. G., & McFall‐Ngai, M. (2024) · Figshare · doi:10.6084/m9.figshare.26579495
Essock-Burns, T., Lawhorn, S., Wu, L., McClosky, S., Moriano‐Gutierrez, S., Ruby, E. G., & McFall‐Ngai, M. (2024) · Figshare · doi:10.6084/m9.figshare.26579501
Alamri, A. M., & AlKhater, S. A. (2022) · Figshare · doi:10.6084/m9.figshare.19094175
Diaz, G. R., Gaire, T. N., Ferm, P., Case, L., Caixeta, L. S., Goldsmith, T., Armstrong, J., & Noyes, N. R. (2023) · Figshare · doi:10.6084/m9.figshare.24715490
Essock-Burns, T., Lawhorn, S., Wu, L., McClosky, S., Moriano‐Gutierrez, S., Ruby, E. G., & McFall‐Ngai, M. (2024) · Figshare · doi:10.6084/m9.figshare.26579498
THE IMPACT OF PROTON PUMP INHIBITORS ON THE GUT MICROBIOME: A REVIEW
Jania, K., Antczak, T., Gajda-Bathelt, M., Dąbek, M., Perlicka, Z., Smolińska, K., Sadkowska, P., Kulczycka, J., Popow, W., & Ciołkosz, M. (2025) · International Journal of Innovative Technologies in Social Science · doi:10.31435/ijitss.3(47).2025.3908
Antić, I. B., & Milutinović, D. V. (2025) · Medicinski podmladak · doi:10.5937/mp76-60610
Correlation Between Dysbiosis and Atrial Fibrillation: What’s New?
Marinacci, B., Mencarelli, N., Stornelli, G., Pellegrini, B., Amedei, A., Gallorini, M., & Grande, R. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms27010073
Wang, Y. X., Li, M., Zhao, W., He, X., & Xiao, S. (2026) · Frontiers in Medicine · doi:10.3389/fmed.2026.1738036
Li, K., Yuan, L., Zhang, J., Li, W., Zhao, G., Chen, Z., Yang, Y., He, Z., & Xiao, P. Y. (2026) · PLoS ONE · doi:10.1371/journal.pone.0340453
Soczyńska, J., Butyńska, K., Ickiewicz, M., Soczyński, O., Pluta, K., Frątczak, A., Gawełczyk, W., & Woźniak, S. (2026) · Gastroenterology Insights · doi:10.3390/gastroent17010009 · Cited by 1
Yuan, Y., Wang, N., Ning, K., & Dang, X. (2026) · Frontiers in Oncology · doi:10.3389/fonc.2026.1774021 · Cited by 1
Tiwary, P., Oswal, K., Tzvetkov, N. T., Litvinova, O., Atanasov, A. G., & Varghese, R. (2026) · Tropical Diseases Travel Medicine and Vaccines · doi:10.1186/s40794-026-00292-5
Balusamy, S. R., Lee, S., Anandapadmanaban, G., Samad, A., Shikder, M. R., Veeramani, C., Alsaif, M. A., Al‐Numair, K. S., Singh, P., & Perumalsamy, H. (2026) · Naunyn-Schmiedeberg s Archives of Pharmacology · doi:10.1007/s00210-026-05084-4
Bai, M., Hu, K., Cui, J., Xia, Q., Li, J., Wang, W., Liu, B., Zhu, X., & 叶琦刚 (2026) · International Journal of General Medicine · doi:10.2147/ijgm.s556875
Jovandarić, M. Z. (2026) · Elsevier eBooks · doi:10.1016/b978-0-443-33931-8.00008-6
Gamage, M. A. G. N. D. M. A., Dissanayake, W. M. N., & Yi, Y. (2026) · Reproductive Biology · doi:10.1016/j.repbio.2026.101213
Rôle des immunoglobulines sécrétoires dans les maladies inflammatoires chroniques de l'intestin
Michaud, E. (2020) · theses.fr (ABES) · doi:10.70675/92102dfez11caz4732zad57z20a2f16673e1
Rôle de la RNase III dans l'adaptation d'Escherichia coli à son environnement
Lejars, M. (2020) · theses.fr (ABES) · doi:10.70675/2219a318z5d00z4fa5zade7z2e6ecc40516c
Gonçalves, L. V. P., Holanda, P. F. D. G., Cabral, A. V. D. S., Nunes, R. G. D. S., Lira, Y. V. D. S., Costa, M. R., Mendonça, I. P., de lima, A. A., de Oliveira, Ê. A. G., Peixoto, C. A., et al. (2026) · Nutritional Neuroscience · doi:10.1080/1028415x.2026.2649604 · Cited by 1
Cognition in the time of dysbiosis: Sleep disruption and the gut-brain dialogue
Andersen, M. L., Alvarenga, T. A., & Tufik, S. E. R. (2026) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2026.111730
Lottermann, E., Reginatto, P., & Fuentefría, A. M. (2026) · Future Microbiology · doi:10.1080/17460913.2026.2671585
Role of Probiotics and Prebiotics in the Dysbiosis of Gut Microbiota
Shad, E., Väkeväinen, K., & Gómez-Gallego, C. (2025) · Springer handbooks · doi:10.1007/978-3-032-01636-2_36
Gut Microbial Dysbiosis in Type 2 Diabetes Patients with Concurrent Atherosclerosis
Sammad, A., Khan, S., Zhang, Y., Bai, X.-L., Zhu, X., & Yin, K. (2026) · Current Atherosclerosis Reports · doi:10.1007/s11883-026-01427-x
New Adjuvant Therapies for Obesity-Related Disorders Associated with Meta-Neuroinflammation
Coluzzi, F., Cornali, K., Scerpa, M. S., & Noce, A. (2026) · Pharmaceuticals · doi:10.3390/ph19050786
Therapeutic potential of phages and phage products combats multidrug resistant bacteria
Abdelaziz, R., Hatem, H., Ali, R. H., Abass, K. S., & Tartor, Y. H. (2026) · Discover Applied Sciences · doi:10.1007/s42452-026-08580-7
Бабинец, Л. С., & Kotsaba, Y. Y. (2026) · Здобутки клінічної і експериментальної медицини · doi:10.11603/1811-2471.2026.v.i1.16130
Wang, Y.-C., Mao, Y.-H., Huang, M.-Q., Wen, T.-C., Luo, Y., Wang, C., & Song, A.-X. (2026) · Foods · doi:10.3390/foods15112038
Probiotic, synbiotic effects on the gut–liver axis: omics-enabled mechanisms and therapeutic windows
Oriquat, G., El‐Sehrawy, A. A. M. A., Abdulsahib, W. K., Mustafa, W. W., Jyothi, S. R., Nayak, P. P., Janney, J. B., Singh, G., Sinha, A., & Yazdi, F. (2026) · Future Microbiology · doi:10.1080/17460913.2026.2684877
Lin, J.-C., Wang, Q.-S., Guo, Z.-M., Zhang, F., & Qiu, C.-Y. (2026) · Acta Odontologica Scandinavica · doi:10.2340/aos.v85.46064
Effects of probiotics intervention on sperm parameters: A systematic review on literature
Shamsi‐Goushki, A., Mahmoodi, M. R., Ashourzadeh, S., Jazinaki, M. S., & Rezvani, R. (2026) · Nutrition and Health · doi:10.1177/02601060261464829
Nadir Hastalıklarda Mikrobiyota: Moleküler Mekanizmalar ve Mikrobiyom Tabanlı Tedavi Potansiyelleri
GÖRGÜN, B. (2026) · Özgür Yayınları eBooks · doi:10.58830/ozgur.pub1358.c5472
Next Generation Probiotics Challenges: A Road to use as Live Bio-Therapeutics
and, H. R., Zaidi, A., & Rashid, H. (2026) · Current Microbiology · doi:10.1007/s00284-026-05044-4 · Cited by 1
Muhammad, Y. A. (2026) · Frontiers in Integrative Neuroscience · doi:10.3389/fnint.2026.1775109
Wang, Y., Fan, R.-Y., Dang, Y.-Z., Han, J.-L., Zhang, J. S., Liu, R.-Z., Li, Z.-Y., Ren, Y., Yang, R. X., Wang, C., et al. (2026) · Pharmacological Research - Reports · doi:10.1016/j.prerep.2026.100098
Microenvironment in IBD: Implications for Drug Release and Nano-Based Targeting Strategies
Garhewal, M., Mishra, A., Verma, S., Sahu, N., Kaur, A., & Vaishnav, Y. (2026) · BENTHAM SCIENCE PUBLISHERS eBooks · doi:10.2174/9798898817268126010005
Guo, H.-K., Mei, G.-F., WU, L.-W., Hong, J.-Q., Wei, S.-M., Yang, Q.-Q., Zhang, B., Cheung, P. C.-K., & Zhang, B.-B. (2026) · Carbohydrate Polymers · doi:10.1016/j.carbpol.2026.125682
Gut Microbiota Dysbiosis in Diabetes: Mechanisms, Biomarkers, and Microbiome Targeted Interventions
Dey, A., Bhattachrjee, A., Modak, K., Chakraborty, B., Gautam, M. K., & Mondal, S. (2026) · SN Comprehensive Clinical Medicine · doi:10.1007/s42399-026-02577-4 · Cited by 1
Therapeutic application of probiotic extracellular vesicles in inflammatory bowel disease
Wang, Y., Sun, Z., Wang, L., Shi, H., Xiao, S., Dong, F., & Qin, N. (2026) · Journal of Advanced Research · doi:10.1016/j.jare.2026.08.016
Zebrafish as a translational model for peptide-mediated synaptic dysfunction related to obesity
Rodrigues, A. C., Lacerda, A. P., Mukoyama, L. T. H., de Carvalho, G. B., da Mata, J. A. L., Buccini, D. F., Franco, O. L., & Migliolo, L. (2026) · Frontiers in Synaptic Neuroscience · doi:10.3389/fnsyn.2026.1845252
Microbiome‐Phytochemical Crosstalk Along the Gut‐Brain Axis in Alzheimer and Parkinson's Disease
Emon, M., Rahaman, M. M., Sarder, D., Shadin, M., Neela, S. A., Wangchuk, P., & Sarker, S. (2026) · MicrobiologyOpen · doi:10.1002/mbo3.70374
Rodríguez-Purata, V. H., González, S. S., Valdez-Palomares, F., Lares-Villaseñor, E., Zarazúa, S., la Cruz-Mosso, U. D., Velazquez-Arjona, W., Leyva‐Ramos, R., Palacios‐González, B., & Morales, J. M. V. (2026) · SSRN Electronic Journal · doi:10.2139/ssrn.7310604
Rose, E. D., D’Aquila, P., Nardo, V. D., Rango, F. D., Sena, G., Perrotta, A., Cundari, C., Bartolo, A. D., Rocca, C., Gabriele, D., et al. (2026) · Journal of Translational Medicine · doi:10.1186/s12967-026-08791-x
Liu, Z., Shi, Q., Teng, H., Li, M., Wang, S., Yang, S., Kong, Y., Lin, X., Wang, J., Zou, Y., et al. (2026) · Materials & Design · doi:10.1016/j.matdes.2026.116859
Innate Lymphoid Cells and diet: the multitask cells in metabolic syndrome progression
Aoki, L. Y., Zicman, G. C., Menezes-Silva, L., Cipelli, M., & Câmara, N. O. S. (2026) · Immunology Letters · doi:10.1016/j.imlet.2026.107237
Ossandón-Pino, N., Mardones, L., & Vidal, P. M. (2026) · Life Sciences · doi:10.1016/j.lfs.2026.124659
Comenic acid as a modulator of the gut-testis axis in pyridaben-induced toxicity
Babenkova, P. I., Golovina, N. A., Reprintseva, V. N., Karaulova, S., Vostrikova, A., Burakova, I. Y., Pogorelova, S. V., Dmitrievna, S. Y., Dmitrievna, M. P., Shutikov, V. A., et al. (2026) · Reproductive Toxicology · doi:10.1016/j.reprotox.2026.109342
Asimakopoulou, S., Pipelias, P., Kassi, E. N., Oikonomou, E. K., Siasos, G., & Darviri, C. (2026) · Nutrients · doi:10.3390/nu18172909
Niu, M., Le, J., Liao, S., & Li, K. (2026) · 3 Biotech · doi:10.1007/s13205-026-05075-5
Jin, X., Liang, D., Liu, S., & Yang, Z. (2026) · Research Square · doi:10.21203/rs.3.rs-10746381/v1
Koterba, M., Skiba, A., Kler, A., Błaszczyk, K., Woźny, M., Stefaniak, O., & Nowicka, J. (2026) · Biomedicines · doi:10.3390/biomedicines14102256
Hod, K., Marasco, G., Colecchia, L., Sperber, A. D., Palsson, O. S., Bangdiwala, S. I., & Barbara, G. (2026) · Internal and Emergency Medicine · doi:10.1007/s11739-026-04546-0
Xenosensors in the gut–liver Axis: from microbiome metabolites to toxic response variability
Motafeghi, F. S., Barghi, E. G., Rahmani, P., Gharab, J. G., Ashari, S., & Ghassemi-Barghi, N. (2026) · Toxicology Research · doi:10.1093/toxres/tfag076
Gamage, M. A. G. N. D. M. A., Dissanayake, W. M. N., Aishcharya, A., Lee, S., & Yi, Y. (2026) · Journal of Biomedical Translational Research · doi:10.12729/jbtr.2026.27.3.83
Luo, J., Li, X., Liu, B., Yu, Y., Shen, X., Liu, H., Hu, S., Luo, Q., Liang, X., Xiong, Y., et al. (2026) · Nutrients · doi:10.3390/nu18203371
Therapeutic Role of Centella asiatica (L.) in Gut Dysbiosis Induced by Environmental Toxic Metals
Ekka, R., Naik, K., Chandel, S. S., Sahu, S. K., & Ahirwar, B. (2026) · Research Journal of Pharmacy and Technology · doi:10.52711/0974-360x.2026.00689
Madella, A. M., van Gerven, C. C. E., Garví, E. S., van Bergenhenegouwen, J., Garssen, J., Masereeuw, R., & Overbeek, S. A. (2026) · Toxins · doi:10.3390/toxins18100451
Zeng, Y., Guo, Y., 袁莉芸, He, Y., Han, Q., Yin, Y., & Zhou, X. (2026) · Probiotics and Antimicrobial Proteins · doi:10.1007/s12602-026-11261-x
Yi, H., Hu, Q., Pu, Y., Xiang, W., Zhou, P., Zhang, Y., Diao, H., Zhao, J., Xiao, Y., & Yan, H. (2026) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.6c10104
Metadata
- Authors
- Weiss, G. A., & Hennet, T.
- Affiliations
- University of Zurich (CH)
- Corresponding author
- Hennet, Thierry
- Venue
- Cellular and Molecular Life Sciences
- Published
- 2017-03-28
- Volume
- 74
- Issue
- 16
- Pages
- 2959-2977
- ISSN
- 1420-682X (ISSN-L)
- 1420-9071
- PMC
- PMC11107543
- OpenAlex
- W2599453585
- Cited by
- 775
- References
- 249
- Citations by year
- 2026: 86 · 2025: 145 · 2024: 124 · 2023: 112 · 2022: 121 · 2021: 72 · 2020: 59 · 2019: 30 · 2018: 18 · 2017: 7
- FWCI
- 2.98
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Cellular and Molecular Life Sciences (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Zurich Open Repository and Archive (University of Zurich) (acceptedVersion, other-oa)
- Zurich Open Repository and Archive (University of Zurich) (submittedVersion, other-oa)
- Zurich Open Repository and Archive (University of Zurich)
- Funders
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (CRSII3_154488/1)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Medicine › Gastroenterology › Gastrointestinal motility and disorders
- Health Sciences › Dentistry › Periodontics › Oral microbiology and periodontitis research
- Keywords
- gut dysbiosis, gut microbiota, microbial diversity, oxidative stress, bacteriophage induction, bacterial toxins, inflammatory bowel disease, obesity, type 2 diabetes, host-microbe interactions
- MeSH terms
- Gastrointestinal Microbiome, Animals, Diet, Pharmaceutical Preparations, Humans, Immunity, Intestinal Mucosa, Intestines, Oxidative Stress, Inflammasomes, Dysbiosis
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review