Dramatic genotypic difference in, and effect of genetic crossing on, tissue culture-induced mobility of retrotransposon Tos17 in rice
Abstract
KEY MESSAGE : We show for the first time that intraspecific crossing may impact mobility of the prominent endogenous retrotransposon Tos17 under tissue culture conditions in rice. Tos17, an endogenous copia retrotransposon of rice, is transpositionally active in tissue culture. To study whether there exists fundamental genotypic difference in the tissue culture-induced mobility of Tos17, and if so, whether the difference is under genetic and/or epigenetic control, we conducted this investigation. We show that dramatic difference in tissue culture-induced Tos17 mobility exists among different rice pure-line cultivars sharing the same maternal parent: of the three lines studied that harbor Tos17, two showed mobilization of Tos17, which accrued in proportion to subculture duration, while the third line showed total quiescence (immobility) of the element and the fourth line did not contain the element. In reciprocal F1 hybrids between Tos17-mobile and -immobile (or absence) parental lines, immobility was dominant over mobility. In reciprocal F1 hybrids between both Tos17-mobile parental lines, an additive or synergistic effect on mobility of the element was noticed. In both types of reciprocal F1 hybrids, clear difference in the extent of Tos17 mobility was noted between crossing directions. Given that all lines share the same maternal parent, this observation indicates the existence of epigenetic parent-of-origin effect. We conclude that the tissue culture-induced mobility of To…
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Global DNA methylation is the most evaluated epigenetic somaclonal variation; in plants it is at higher levels than in other eukaryotes and is correlated with expression of different genes and changes in mobility of transposable elements.
“The most evaluated epigenetic somaclonal variation is global DNA methylation, which, in plants, is at higher levels compared with other eukaryotes, and is correlated with the expression of different genes, and changes in the mobility of the numerous transposable elements presented in plant genomes [99,101,102,103,104,105,106,107,108,109].”
From Somaclonal Variation—Advantage or Disadvantage in Micropropagation of the Medicinal Plants (2023) · cites this paper as [109]
Cited by
Sorted by citations
Somaclonal Variation—Advantage or Disadvantage in Micropropagation of the Medicinal Plants
Duta-Cornescu, G., Constantin, N., Pojoga, D.-M., Nicuta, D., & Simon-Gruita, A. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24010838 · Cited by 108 · see citing works
- Authors
- Lin, C., Lin, X., Hu, L., Yang, J., Zhou, T., Long, L., Xu, C., Xing, S., Qi, B., Dong, Y., & Liu, B.
- Affiliations
- Northeast Normal University (CN)
- Jilin Academy of Agricultural Sciences (CN)
- Corresponding author
- Dong, Yingshan
- Venue
- Plant Cell Reports
- Published
- 2012-09-04
- Volume
- 31
- Issue
- 11
- Pages
- 2057-2063
- ISSN
- 0721-7714 (ISSN-L)
- 1432-203X
- OpenAlex
- W2073742214
- Cited by
- 11
- References
- 0
- Citations by year
- 2024: 2 · 2023: 1 · 2022: 1 · 2017: 1 · 2016: 2 · 2014: 1 · 2013: 2 · 2012: 1
- FWCI
- 1.46
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Plant Cell Reports (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Natural Science Foundation of China
- Topics
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Chromosomal and Genetic Variations
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Genetic and Mutation Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant tissue culture and regeneration
- Keywords
- endogenous retrotransposons, rice, copia-like retrotransposons, reciprocal F1 hybrids, genotypic variation
- MeSH terms
- Crosses, Genetic, Genotype, Oryza, Blotting, Southern, Retroelements, DNA, Plant, Genome, Plant, Epigenesis, Genetic, Tissue Culture Techniques, DNA Copy Number Variations
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review