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Genotyping of Indian Yersinia pestis strains by MLVA and repetitive DNA sequence based PCRs

Kingston, Joseph J., Tuteja, Urmil, Kapil, Minakshi, Murali, Harishchandra S., Batra, Harsh V.·2009·Antonie van Leeuwenhoek
DOI 10.1007/s10482-009-9347-2
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Abstract

India experienced two plague outbreaks in Gujarat and Maharastra during 1994 and then in the Shimla district of Himachal Pradesh during 2002. Yersinia pestis strains recovered from rodents and pneumonic patients during the 1994 outbreaks, pneumonic patients from the 2002 Shimla outbreak and rodents trapped on the Deccan Plateau during a surveillance activity carried out in 1998 were characterized by MLVA, ERIC-PCR and ERIC-BOX-PCR. MLVA genotyping of Indian Y. pestis strains revealed strains of 2 Orientalis, 1 Mediaevalis and 1 Antiqua genotypes distributed in three distinct branches corresponding to their biovar. The Orientalis genotype strains recovered from the 1994 outbreaks and 1998 surveillance activity clustered in one branch while the Antiqua biovar strains from the Shimla outbreak and the Mediaevalis strain recovered from a rodent trapped on the Deccan Plateau region during surveillance formed the other branches. The Orientalis Y. pestis strains recovered from rodents and patients from the 1994 plague outbreaks exhibited similar MLVA, ERIC-PCR and ERIC-BOX-PCR profiles and these were closely related to the Orientalis strains recovered from the rodents trapped on the Deccan Plateau. These data provide evidence for the possible linkage between the Y. pestis strains resident in the endemic region and those that were associated with the 1994 plague outbreaks. Mediaevalis and Antiqua biovars also were recovered from the environmental reservoir on the Deccan Plateau and fr…

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Research works printed but not linked: 26

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Metadata

Authors
Kingston, J. J., Tuteja, U., Kapil, M., Murali, H. S., & Batra, H. V.
Venue
Antonie van Leeuwenhoek
Publisher
Springer Science and Business Media LLC
Published
2009-05-16
Volume
96
Issue
3
Pages
303-312
ISSN
  • 0003-6072
  • 1572-9699
DOI
10.1007/s10482-009-9347-2
Cited by
24
References
0
Language
en
Licence
www.springer.com/tdm (tdm)

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CoChat. (2026). Citation check: Genotyping of Indian Yersinia pestis strains by MLVA and repetitive DNA sequence based PCRs. https://app.cochat.ai/papers/10.1007/s10482-009-9347-2
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Kingston, J. J., Tuteja, U., Kapil, M., Murali, H. S., & Batra, H. V. (2009). Genotyping of Indian Yersinia pestis strains by MLVA and repetitive DNA sequence based PCRs. Antonie van Leeuwenhoek. https://doi.org/10.1007/s10482-009-9347-2