The DOI matches its Crossref record; 109 of the 109 references it cites were found in a registry or an index.
Integrating microbial ecology into ecosystem models: challenges and priorities
Open accessAbstract
Microbial communities can potentially mediate feedbacks between global change and ecosystem function, owing to their sensitivity to environmental change and their control over critical biogeochemical processes. Numerous ecosystem models have been developed to predict global change effects, but most do not consider microbial mechanisms in detail. In this idea paper, we examine the extent to which incorporation of microbial ecology into ecosystem models improves predictions of carbon (C) dynamics under warming, changes in precipitation regime, and anthropogenic nitrogen (N) enrichment. We focus on three cases in which this approach might be especially valuable: temporal dynamics in microbial responses to environmental change, variation in ecological function within microbial communities, and N effects on microbial activity. Four microbially-based models have addressed these scenarios. In each case, predictions of the microbial-based models differ—sometimes substantially—from comparable conventional models. However, validation and parameterization of model performance is challenging. We recommend that the development of microbial-based models must occur in conjunction with the development of theoretical frameworks that predict the temporal responses of microbial communities, the phylogenetic distribution of microbial functions, and the response of microbes to N enrichment.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
(2007) · Medical Entomology and Zoology · Cited by 9,612
Temperature sensitivity of soil carbon decomposition and feedbacks to climate change
Davidson, E. A., & Janssens, I. A. (2006) · Nature · doi:10.1038/nature04514 · Cited by 6,919
HUMAN ALTERATION OF THE GLOBAL NITROGEN CYCLE: SOURCES AND CONSEQUENCES
Vitousek, P. M., Aber, J. D., Howarth, R. W., Likens, G. E., Matson, P. A., Schindler, D. W., Schlesinger, W. H., & Tilman, D. G. (1997) · Ecological Applications · doi:10.1890/1051-0761(1997)007[0737:haotgn]2.0.co;2 · Cited by 5,390
TOWARD AN ECOLOGICAL CLASSIFICATION OF SOIL BACTERIA
Fierer, N., Bradford, M. A., & Jackson, R. B. (2007) · Ecology · doi:10.1890/05-1839 · Cited by 5,079
Self-citationMycorrhizal fungal diversity determines plant biodiversity, ecosystem variability and productivity
van der Heijden, M. G. A., Klironomos, J. N., Ursic, M., Moutoglis, P., Streitwolf-Engel, R., Boller, T., Wiemken, A., & Sanders, I. R. (1998) · Nature · doi:10.1038/23932 · Cited by 3,553
Biogeochemistry: an Analysis of Global Change
(1991) · Elsevier eBooks · doi:10.1016/c2012-0-01654-7 · Cited by 3,443
Christensen, J. H., Hewitson, B. C., Busuioc, A., Chen, A., Gao, X., Held, R., Jones, R., Kolli, R. K., Kwon, W., Laprise, R., et al. (2007) · Helmholtz-Zentrum für Polar-und Meeresforschung (Alfred-Wegener-Institut) · Cited by 3,177
Resistance, resilience, and redundancy in microbial communities
Allison, S. D., & Martiny, J. B. H. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0801925105 · Cited by 3,151
MICROBIAL STRESS-RESPONSE PHYSIOLOGY AND ITS IMPLICATIONS FOR ECOSYSTEM FUNCTION
Schimel, J., Balser, T. C., & Wallenstein, M. (2007) · Ecology · doi:10.1890/06-0219 · Cited by 3,045
Self-citation
Cited by
Fungal traits that drive ecosystem dynamics on land
Treseder, K. K., & Lennon, J. T. (2015) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00001-15 · Cited by 625
Self-citationExplicitly representing soil microbial processes in Earth system models
Wieder, W. R., Allison, S. D., Davidson, E. A., Georgiou, K., Hararuk, O., He, Y., Hopkins, F., Luo, Y., Smith, M. J., Sulman, B., et al. (2015) · Global Biogeochemical Cycles · doi:10.1002/2015gb005188 · Cited by 411
Bissett, A., Brown, M. V., Siciliano, S. D., & Thrall, P. H. (2013) · Ecology Letters · doi:10.1111/ele.12109 · Cited by 339
Ecology of Nitrogen Fixing, Nitrifying, and Denitrifying Microorganisms in Tropical Forest Soils
Pajares, S., & Bohannan, B. J. M. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.01045 · Cited by 331
Wang, G., Post, W. M., & Mayes, M. A. (2013) · Ecological Applications · doi:10.1890/12-0681.1 · Cited by 285
Metadata
- Authors
- Treseder, K. K., Balser, T. C., Bradford, M. A., Brodie, E. L., Dubinsky, E. A., Eviner, V. T., Hofmockel, K. S., Lennon, J. T., Levine, U. Y., MacGregor, B. J., Pett-Ridge, J., & Waldrop, M. P.
- Venue
- Biogeochemistry
- Published
- 2011-09-03
- Volume
- 109
- Issue
- 1-3
- Pages
- 7-18
- ISSN
- 0168-2563 (ISSN-L)
- 1573-515X
- OpenAlex
- W2102018547
- Cited by
- 256
- References
- 109
- FWCI
- 27.74
- Type
- journal article
- Language
- en
- Open access
- green
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Integrating microbial ecology into ecosystem models: challenges and priorities. https://app.cochat.ai/papers/10.1007/s10533-011-9636-5
- The paper
- Treseder, K. K., Balser, T. C., Bradford, M. A., Brodie, E. L., Dubinsky, E. A., Eviner, V. T., Hofmockel, K. S., Lennon, J. T., Levine, U. Y., MacGregor, B. J., Pett-Ridge, J., & Waldrop, M. P. (2012). Integrating microbial ecology into ecosystem models: challenges and priorities. Biogeochemistry. https://doi.org/10.1007/s10533-011-9636-5
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.