The metabolomics standards initiative (MSI)

Genomics, gene expression and DNA arrays

Lockhart, D. J., & Winzeler, E. A. (2000) · Nature · doi:10.1038/35015701 · Cited by 2,055

Contemporary issues in toxicology the role of metabonomics in toxicology and its evaluation by the COMET project

Lindon, J. C., Nicholson, J. K., Holmes, E. C., Antti, H., Bollard, M. E., Keun, H. C., Beckonert, O. P., Ebbels, T. M. D., Reily, M. D., Robertson, D. G., et al. (2003) · Toxicology and Applied Pharmacology · doi:10.1016/s0041-008x(02)00079-0 · Cited by 385

A proposed framework for the description of plant metabolomics experiments and their results

JENKINS, H. A., Hardy, N. W., Beckmann, M., Draper, J., SMITH, A. R., Taylor, J., Fiehn, O., Goodacre, R., Bino, R. J., Hall, R. D., et al. (2004) · Nature Biotechnology · doi:10.1038/nbt1041 · Cited by 285

Summary recommendations for standardization and reporting of metabolic analyses

The Standard Metabolic Reporting Structures working group (2005) · Nature Biotechnology · doi:10.1038/nbt0705-833 · Cited by 277

Molecular systems biology

Sewald, N., & Pühler, A. (2007) · Journal of Biotechnology · doi:10.1016/j.jbiotec.2007.02.010 · Cited by 130

Establishing Reporting Standards for Metabolomic and Metabonomic Studies: A Call for Participation

Fiehn, O., Kristal, B. S., van Ommen, B., Sumner, L. W., Sansone, S., Taylor, C., Hardy, N. W., & Kaddurah‐Daouk, R. (2006) · OMICS A Journal of Integrative Biology · doi:10.1089/omi.2006.10.158 · Cited by 108

The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics

Jones, A. R., Miller, M., Aebersold, R. H., Apweiler, R., Ball, C. A., Brāzma, A., DeGreef, J., Hardy, N. W., Hermjakob, H., Hubbard, S. J., et al. (2007) · Nature Biotechnology · doi:10.1038/nbt1347 · Cited by 106

Metabolomics Standards Workshop and the development of international standards for reporting metabolomics experimental results

Castle, A. L. (2006) · Briefings in Bioinformatics · doi:10.1093/bib/bbl008 · Cited by 102

The Work of the Human Proteome Organisation's Proteomics Standards Initiative (HUPO PSI)

Taylor, C. F., Hermjakob, H., Julian, R. K., Garavelli, J. S., Aebersold, R. H., & Apweiler, R. (2006) · OMICS A Journal of Integrative Biology · doi:10.1089/omi.2006.10.145 · Cited by 74

MGED Standards: Work in Progress

Ball, C. A., & Brāzma, A. (2006) · OMICS A Journal of Integrative Biology · doi:10.1089/omi.2006.10.138 · Cited by 64

MolFind2: A Protocol for Acquiring and Integrating MS3 Data to Improve In Silico Chemical Structure Elucidation for Metabolomics

Samaraweera, M. A., Hill, D. W., & Grant, D. F. (2019) · Methods in molecular biology · doi:10.1007/978-1-0716-0030-6_18 · Cited by 3

Use of Molecular Networking for Compound Annotation in Metabolomics

Moura, M. D. S., Bellete, B. S., Vieira, L. C. C., & Sampaio, O. M. (2021) · Revista Virtual de Química · doi:10.21577/1984-6835.20210116 · Cited by 4

Metabolomic Contributions to Chemical Ecology

Potin, P., Nicolè, F., & Thomas, O. (2016) · doi:10.1002/9781119329695.ch7 · Cited by 3

Environmental Metabolomics

Bearden, D. W. (1996) · Wiley eBooks · doi:10.1002/9780470034590.emrstm1256 · Cited by 3

Systems biology illuminates alternative metabolic niches in the human gut microbiomePreprint

Noecker, C. A., Sánchez, J. M., Bisanz, J. E., Escalante, V., Alexander, M., Trepka, K. R., Heinken, A., Liu, Y., Dodd, D., Thiele, I., et al. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.09.19.508335 · Cited by 3

Metabolomics of Mouse Embryonic CSF Following Maternal Immune ActivationPreprint

Petrova, B., Lacey, T. E., Culhane, A. J., Cui, J., Raskin, A., Misra, A., Lehtinen, M. K., & Kanarek, N. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.12.06.570507 · Cited by 3

TraceMetrix: a traceable metabolomics interactive analysis platform

Chen, W., An, Y., Chen, Z., Luo, R., Lu, Q., Li, C., Zhang, C., Huang, Q., Chen, Q., Zhang, L., et al. (2025) · Journal of Cheminformatics · doi:10.1186/s13321-025-01095-0 · Cited by 2

Preeclampsia Diagnostics and Therapeutics: Advances, Challenges, and Prospects in Nanoscale Exosome-Based Clinical Translation

Shaon, M. A., Farhana, F. Z., Sikder, R., Shrestha, K. P., Haque, F., Tantu, M. T., Manjur, O. H. B., Aktar, S., Koo, K. M., Ross, A. G., et al. (2025) · ACS Nano Medicine · doi:10.1021/acsnanomed.5c00056 · Cited by 3

Metabolomic profiling of Musanga cecropioides leaf extract reveals cytotoxic mechanisms in MCF-7 breast cancer cells

Olaleye, O. O., Kim, D., & Spriggs, K. A. (2025) · Pharmaceutical Science Advances · doi:10.1016/j.pscia.2025.100107 · Cited by 2

Comparative analysis of storage quality and metabolite profiles in onion bulbs according to cultivar and cultivation region

Kim, D.-S., Lee, J. G., Park, D.-G., Lee, J., Yun, Y. E., Jang, Y. J., Lim, S., Cho, J.-H., Lee, J., & Han, J. (2025) · Food Science and Preservation · doi:10.11002/fsp.2025.32.5.776 · Cited by 2

The intricate interplay of microbial metabolomics and carcinogenesis: a spotlight on mechanistic pathways, clinical implications and methodological challenges

Eysha, M., Fouani, M., Munir, M., Black, M., Long, A., Elchouemi, M., Singh, S., & Abid, M. B. (2026) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2026.1787954 · Cited by 2

Computational Core for Plant Metabolomics: A Case for Interdisciplinary Research

Pudi, V., Rani, P., Mitra, A., & Ghosh, I. (2017) · Lecture notes in computer science · doi:10.1007/978-3-319-72413-3_15 · Cited by 2

Specialty Grand Challenge: Data and Model Integration in Systems Biology

Saccenti, E. (2021) · Frontiers in Systems Biology · doi:10.3389/fsysb.2021.800894 · Cited by 2

Comparison of Amine-Modified Polymeric Stationary Phases for Polar Metabolomic Analysis Based on Unified-Hydrophilic Interaction/Anion Exchange Liquid Chromatography/High-Resolution Mass Spectrometry (Unified-HILIC/AEX/HRMS)

Ikeda, K., Takahashi, M., Bamba, T., & Izumi, Y. (2024) · Mass Spectrometry · doi:10.5702/massspectrometry.a0143 · Cited by 2

Reduction in creatine metabolites in macrophages exposed to small molecule analogues of the anti‐inflammatory parasitic worm product ES‐62

Alanazi, S., Doonan, J., Lumb, F. E., Alenzi, N., Jabbar, S., Al‐Riyami, L., Suckling, C. J., Harnett, W., & Watson, D. G. (2024) · Parasite Immunology · doi:10.1111/pim.13026 · Cited by 1

Techniques, Databases and Software Used for Studying Polar Metabolites and Lipids of Gastrointestinal Parasites

Wangchuk, P., & Yeshi, K. (2024) · Animals · doi:10.3390/ani14182671 · Cited by 2

Checkpoints for preliminary identification of small molecules found enriched in autophagosomes and activated mast cell secretions analyzed by comparative UPLC/MS e

Satori, C. P., Ramezani, M., Koopmeiners, J. S., Meyer, A. F., Rodríguez‐Navarro, J. A., Kuhns, M. M., Taylor, T. H., Haynes, C. L., Dalluge, J. J., & Arriaga, E. A. (2016) · Analytical Methods · doi:10.1039/c6ay02500e · Cited by 2

Mass Spectrometry for Metabolomics and Biomass Composition Analyses

Ricci-Silva, M. E., Vaz, B. G., Vasconcelos, G. A., Romão, W., Aricetti, J. A., Caldana, C., & Abdelnur, P. V. (2016) · Springer eBooks · doi:10.1007/978-3-319-41414-0_5 · Cited by 2

Acute sublethal exposure to a neonicotinoid pesticide triggers a short-term metabolic response in honey bee larvae

Paten, A. M., Taylor, M. C., Williams, M. R., Warden, A. C., & Kumar, A. (2022) · Elsevier eBooks · doi:10.1016/b978-0-12-816460-0.00007-1 · Cited by 2

I spy with my little eye something beginning with … ‘H’

Goodacre, R. (2014) · Metabolomics · doi:10.1007/s11306-014-0762-7 · Cited by 1

Mass Spectrometry-Based Metabolomic Analysis

Pickford, R. (2018) · Elsevier eBooks · doi:10.1016/b978-0-12-809633-8.20252-5 · Cited by 2

Decoding Nature's Conversations: Metabolomics and the Intriguing World of Plant-Microbe InteractionsPreprint

Fan, K. (2024) · doi:10.22541/au.171934398.85448535/v1 · Cited by 2

Symphonies of metabolomics

Slenter, D. (2024) · Research Publications (Maastricht University) · doi:10.26481/dis.20240624ds · Cited by 2

Community insights and guidance from the field

Beale, D. J., & Jones, O. A. H. (2022) · Elsevier eBooks · doi:10.1016/b978-0-12-816460-0.00025-3 · Cited by 1

Untargeted HR-MS Profiling and Discrimination of Coffea arabica L. Leaves under Different Postharvest Production Processes

Rovelli, D., Righetti, L., Nucci, A., Pugliese, M. B., Serito, B., Bruni, R., & Dall’Asta, C. (2024) · ACS Food Science & Technology · doi:10.1021/acsfoodscitech.4c00054 · Cited by 1

Unraveling the mechanisms of ethylene-induced regulation of energy cane shoot and root development

de Abreu, L. G. F., Lima, R. D., Rivera, F., Ferrari, A., Silva, N. V., Fill, T. P., Pilau, E. J., Fiamenghi, M. B., Carazzolle, M. F., Grassi, M. C. B., et al. (2024) · Industrial Crops and Products · doi:10.1016/j.indcrop.2024.119675 · Cited by 1

Biotechnological Approach for Development and Characterization of Protein Feed for Melipona quadrifasciata

Miranda-Pinto, P., Soares, J. K. C., Gonzalez, I. H. L., Diogo, Y. R., de Medeiros, L. S., Caperuto, L. C., Ramos, P. L., Francoy, T. M., & Morais, M. M. (2025) · Agriculture · doi:10.3390/agriculture15020168 · Cited by 1

Formulation and evaluation of a functional beverage from Ilex guayusa Loes. (Aquifoliaceae): Chemical analysis, antioxidant activity, and sensory acceptance

Sequeda-Castañeda, L. G., Bermeo-Pulido, L. D., Piñeros-Castro, Y., Costa, G. M., & Castillo-Quiroga, Y. M. (2026) · Food and Humanity · doi:10.1016/j.foohum.2026.101075 · Cited by 1

Multi-Omics Integration to Investigate the Effects of Variety and Origin on Volatile and Non-Volatile Metabolites in Melons

Hua, J., Mao, K., Yu, W., Li, Z., Wen, R., Li, L., Song, L., Sang, Y., & Wang, X. (2026) · Foods · doi:10.3390/foods15101746 · Cited by 1

Ginsenoside Rh2 alleviates acne-associated inflammation for cosmetic applications

Gao, W., Gao, M., Zhang, X., Liang, Z., & Xia, P. (2026) · Industrial Crops and Products · doi:10.1016/j.indcrop.2026.123728 · Cited by 1

Secondary Metabolite Profiling, Antiproliferative Evaluation, and Terpenoid Prioritization of Indonesian Cardamom (Amomum compactum) Accessions

Nurcholis, W., Ishlah, T. S., Amanda, C. N., Batubara, I., Rafi, M., Heryanto, R., Dewi, M., Rustamaji, H. C., Tedjo, A., Priosoeryanto, B. P., et al. (2026) · Plants · doi:10.3390/plants15162538 · Cited by 1

Mass spectrometry: system based analysis

Urban, J., Vaněk, J., & Štys, D. (2010) · IFAC Proceedings Volumes · doi:10.3182/20100707-3-be-2012.0040 · Cited by 1

The application of systems biology to biomanufacturing

Benavente, L. M., Goldberg, A., Myburg, H., Chiera, J. M., Zapata, M., & van Zyl, L. (2015) · Pharmaceutical Bioprocessing · doi:10.4155/pbp.15.12 · Cited by 2

Metabolic Fingerprinting of In Vitro Cancer Cell Samples

Armitage, E. G., Kotze, H. L., & Williams, K. J. (2014) · SpringerBriefs in systems biology · doi:10.1007/978-1-4939-0615-4_3 · Cited by 1

Overview

Chen, X., Qi, X., & Duan, L.-X. (2014) · Springer eBooks · doi:10.1007/978-94-017-9291-2_1 · Cited by 1

Plant Metabolomics: The Great Potential of Plant Metabolomics in Big Data Biology

Kusano, M., & Fukushima, A. (2022) · CABI eBooks · doi:10.1079/9781789247534.0004 · Cited by 1

Análise de Dados de Metabolômica em Produtos Naturais: uma Revisão-Tutorial

Maimone, N. M., Pereira, A. K., Gimenes, L., Fernandes, H. P., Fill, T. P., Borges, R. M., de Lira, S. P., Fernandes, J. B., & Bauermeister, A. (2023) · Revista Virtual de Química · doi:10.21577/1984-6835.20230066 · Cited by 1

Biochemical Profiling of Urine Metabolome in Premature Infants Based on LC−MS Considering Maternal Influence

Mok, J.-H., Song, J. H., Hahn, W.-H., Cho, S., Park, J., Koh, J., Kim, H., & Kang, N. M. (2024) · Nutrients · doi:10.3390/nu16030411 · Cited by 1

Integrated workflows using metabolomics, genome mining, and biological evaluation reveal oxepine‑sulfur-containing anti-cryptococcal diketopiperazine produced by the endophyte Penicillium setosum

de Oliveira, C. M. D. S. C., Bassicheto, M. C., Barbosa, R. S., Neves, K. D. O. G., Monteiro, C. D. S., Uemi, M., Pascon, R. C., da Silva, G. F., Koolen, H. H. F., & de Medeiros, L. S. (2024) · Fitoterapia · doi:10.1016/j.fitote.2024.106301 · Cited by 1

Green Separation Techniques for -Omics Platforms: Supercritical Fluid Chromatography

Jumhawan, U., & Bamba, T. (2020) · Elsevier eBooks · doi:10.1016/b978-0-08-100596-5.22823-0 · Cited by 1

Introduction to Bioanalytical Mass Spectrometry

Martins, D. N., Vendramini, P. H., Simionato, A. V. C., & Sussulini, A. (2021) · Springer eBooks · doi:10.1007/978-3-030-82381-8_23 · Cited by 2

Development of data processing methods for high resolution mass spectrometry-based metabolomics with an application to human liver transplantation

Hrydziuszko, O. (2013) · University of Birmingham Institutional Research Archive (University of Birmingham) · Cited by 1

Metabolic Profiling Approaches for the Identification of Bioactive Metabolites in Plants

Pipan, E., & Calderón, Á. I. (2015) · Wiley eBooks · doi:10.1002/9783527673391.ch6 · Cited by 1

Metabolic fingerprinting applied in diatom taxonomy

Huseby, S. (2012) · NORA - Norwegian Open Research Archives · Cited by 1

Linking metabolomics with quality traits in crop plants

Lange, B. M. (2013) · doi:10.4155/ebo.13.413 · Cited by 1

Offline Two-dimensional Liquid Chromatography-Mass Spectrometry for Deep Annotation of the Fecal MetabolomePreprint

Anderson, B. G., Raskind, A. B., Hissong, R., Dougherty, M., McGill, S., Gulati, A., Theriot, C. M., Kennedy, R. T., & Evans, C. R. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.05.31.543178 · Cited by 1

Metabolomics in Plant-Microbe Interactions: Unveiling Chemical Dialogues and Advancing AgriculturePreprint

Fan, K., & Xu, Y. (2024) · doi:10.31219/osf.io/43ueb · Cited by 1

Ecologie chimique du dinoflagellé toxique Ostreopsis cf. ovata en Méditerranée Nord Occidentale

Pavaux, A. (2019) · doi:10.70675/b4c58996z81b3z4688za74bz52a521f21d6c · Cited by 1

Multivariate profiling of metabolites in human disease : Method evaluation and application to prostate cancer

Thysell, E. (2012) · KTH Publication Database DiVA (KTH Royal Institute of Technology)

Metabolic Profiling for Biomarker Discovery

Keun, H. C. (2010) · Biomarkers · doi:10.1002/9780470918562.ch4

Metabolomics based annotation of novel genes in Arabidopsis thaliana

Moon, S. M. (2008) · doi:10.31274/etd-180810-1711

Mass Spectrometry in Agriculture, Food, and Flavors: Selected Applications

Stobiecki, M., Kachlicki, P., & Jeleń, H. H. (2012) · Wiley eBooks · doi:10.1002/9781118180730.ch24

Standards for Functional Genomics

Chervitz, S. A., Parkinson, H., Fostel, J. M., Causton, H. C., Sanson, S.-A., Deutsch, E. W., Field, D., Taylor, R. C., Rocca‐Serra, P., White, J., et al. (2009) · Springer eBooks · doi:10.1007/978-0-387-92738-1_15

Multivariate NMR analysis of human disease models

Duggan, G. E. (2013) · Libraries and Cultural Resources (University of Calgary) · doi:10.11575/prism/27043

Quantitative Quantum Mechanical Analysis of 1 H NMR Spectra

Tiainen, M. (2013)

Multivariate Profiling of Metabolites in Human Disease

Thysell, E. (2012)

Metabolite Profiling of Cereals – A Promising Tool for the Assessment of Grain Quality and Safety

Frank, T., Röhlig, R. M., & Engel, K. (2011) · ACS symposium series · doi:10.1021/bk-2011-1089.ch004

LC–MS data acquisition and validation in metabolomics

Callahan, D. L. (2015) · doi:10.4155/fseb2013.14.130

Top-Down Metabolomics Approaches: Nitrogen- and Sulfur-Omics by Ultrahigh-Resolution Fourier Transform Ion Cyclotron Resonance-Mass Spectrometry

Nakabayashi, R., & Saito, K. (2020) · Elsevier eBooks · doi:10.1016/b978-0-12-409547-2.14823-1

Metabolomics – Nutritional and Physiological Challenges

Suárez, M., Canela-Canela, N., Bas-Prior, J. M. D., Puiggròs, F., Arola, L., & Caimari, A. (2020) · Elsevier eBooks · doi:10.1016/b978-0-08-100596-5.22826-6

Centralizing data to unlock whole-cell models

Chew, Y. H., & Karr, J. R. (2021) · Current Opinion in Systems Biology · doi:10.1016/j.coisb.2021.06.004

Pathway analysis

Cavill, R., & Bouwman, J. (2022) · Elsevier eBooks · doi:10.1016/b978-0-323-85062-9.00011-8

Metabolom roślinny

Stobiecki, M., & Kachlicki, P. (2010) · Wydawnictwa Uniwersytetu Warszawskiego eBooks · doi:10.31338/uw.9788323533399.pp.429-444

Applied environmental metabolomics: Eliciting viewpoints from the metabolomics research community

Hillyer, K. E., Beale, D. J., & Jones, O. A. H. (2022) · Elsevier eBooks · doi:10.1016/b978-0-12-816460-0.00024-1

Metabolomics applied to the discovery of new bioactive pharmaceuticals in complex matrices

Schmitz, C., Nunes, A., Munaro, D., Gerber, T., & Maraschin, M. (2022) · Studies in natural products chemistry · doi:10.1016/b978-0-323-91099-6.00006-2

Estudo metabolômico de bactérias marinhas: avaliação das atividades larvicida e citotóxica de seus extratos

Moreira, E. A. (2022) · doi:10.11606/t.60.2022.tde-25082023-090154

Investigação do perfil metabólico do "Biofertilizante Vorax®" obtido através do processo de fermentação de Corynebacterium glutamicum e seu potencial uso na agricultura

de Oliveira, L. F. (2022) · doi:10.47749/t/unicamp.2022.1239278

Metabolomics Unveils Plant-Microbe Interactions: Advancing Agricultural SustainabilityPreprint

Xu, Y., & Fan, K. (2024) · SSRN Electronic Journal · doi:10.2139/ssrn.4857592

Development and Optimization Method for Determination of the Strawberries’ Aroma Profile

Bešlić, I. P., Ivešić, M., Andačić, I. M., Kovačević, D. B., Žuntar, I., Markovinović, A. B., Oštarić, F., & Krivohlavek, A. (2024) · Molecules · doi:10.3390/molecules29143441

Fundamental Investigation of Signal Drift in Continuous Liquid Chromatography/High Resolution Mass Spectrometric Plasma Analysis Toward Global Metabolomics

WATANABE, M., Maekawa, M., Sato, T., Sato, Y., Kumondai, M., Kikuchi, M., & Mano, N. (2024) · Chromatography · doi:10.15583/jpchrom.2023.023

Characterising the urinary metabolome in HIV/TB coinfection and the impact of antiretroviral treatment

Allen, B., Wood, R., & Luies, L. (2024) · BMC Infectious Diseases · doi:10.1186/s12879-025-12389-x

Mass Spectrometry-Based Metabolomic Analysis

Pickford, R. (2019) · Elsevier eBooks · doi:10.1016/b978-0-323-95502-7.00322-5

MetWare: metabolomics database project started on SourceForge

Willighagen, E. (2007) · doi:10.59350/j6f3x-a2q13

Quality evaluation of metabolite annotation based on comprehensive simulation of MS/MS data from high-resolution mass spectrometry (HRMS) and similarity scoring

Shi, Y., Yang, J., Yang, Q., Zhang, Y., & Zeng, Z. (2025) · Analytical and Bioanalytical Chemistry · doi:10.1007/s00216-025-05847-7

Mass Spectrometry for Metabolomics and Biomass Composition Analyses

Ricci-Silva, M. E., Vaz, B. G., Vasconcelos, G. A., Romão, W., Aricetti, J. A., Caldana, C., & Abdelnur, P. V. (2025) · Springer eBooks · doi:10.1007/978-3-031-89138-0_5

Use of environmental forensics to assess land sustainability: a case study on a former coal mining site

Salaudeen, I. A., Randall, K., Basu, N., Cheung, W., Nicholson, C. E., Perry, J. J. B., & Dean, J. R. (2025) · Environmental Science Advances · doi:10.1039/d5va00229j

MetWare: metabolomics database project started on SourceForge

Willighagen, E. (2007) · doi:10.59350/ebteg-b0e64

Bleach rescues Nannochloropsis from an obligate parasite and alters microbial and metabolite signatures of outdoor cultures

Getto, S., Martinez, H., Deshpande, A., Laurens, L. M. L., & Corcoran, A. A. (2025) · Algal Research · doi:10.1016/j.algal.2025.104415

Multi-Omics Modelling of Plasma pTau181, GFAP, and Metabolic Features Enables Risk Stratification in Prodromal Alzheimer’s DiseasePreprint

Kačerová, T., Miller, J. J. J. J., Radford‐Smith, D. E., Smith, S. M., Jeans, A. F., Jernerén, F., Shepherd, D., Pires, E., de Jel, S., Gong, Q., et al. (2025) · medRxiv · doi:10.1101/2025.11.12.25339932

Characterization and Chemoinformatic Prediction of Retention Indices of Metabolites in Coffee and Plantain Byproduct Flours Using Gas Chromatography–Time-of-Flight Mass Spectrometry

Torres‐Valenzuela, L. S., Franco-Urbano, C., Porras, D. P. N., Sarmiento, N., & Rojas, C. (2025) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.5c11135

Non-targeted metabolomics characterization of Annona derivatives with lethal and sublethal toxicities to coffee leaf miner

Gorri, J. E. R., Maimone, N. M., Gonçalves, G. L. P., Sartori, A. G. D. O., Faria, R. D., Vendramim, J. D., Baldin, E. L. L., de Lira, S. P., & Ribeiro, L. D. P. (2025) · Journal of Pest Science · doi:10.1007/s10340-025-01965-4

Effect of perinatal ampicillin or amoxicillin/clavulanate exposure on maternal and infant gut microbiome, metabolome, and infant responses to the 20-valent pneumococcal conjugate vaccine

Suzuki, E., Deleray, V., Zemlin, J., Kousha, A., Nonoguchi, H. A., Sun, D., Tsai, C., Zuffa, S., Kvitne, K. E., Dorrestein, P. C., et al. (2026) · Gut Microbes Reports · doi:10.1080/29933935.2026.2705707

Effect of single binge alcohol consumption on alcohol-naïve and -exposed drinking mouse models

Qinna, N. A., Ghanim, B. Y., Abuarqoub, D. A., Abdallah, Q., Jaber, M. A., AlNatoor, M., Sabbah, D., Alkhawaja, B. A., & Kim, D. (2025) · Food and Chemical Toxicology · doi:10.1016/j.fct.2025.115899

β-caryophyllene mitigates metabolic dysfunction in the testes of gerbils perinatally exposed to BPA

Silva, S. B., Martins, A. D., Moreira, R., Ruiz, T. F. R., Grigio, V., Oliveira, P. F., Taboga, S. R., Vilamaior, P. S. L., & Alves, M. G. (2025) · Reproductive Toxicology · doi:10.1016/j.reprotox.2025.109155

Methods for Studying Bacterial Metabolism

Soni, V., & Upadhyay, A. (2026) · Springer eBooks · doi:10.1007/978-3-031-46895-7_3

Urine metabolomics for seronegative rheumatoid arthritis: an exploratory dual-platform analysis

Peddi, K., Cheekatla, S. S., Davulury, U., Ushus, M. J. P., Mutyam, S., Kandula, S. K., Munagala, V. V. R., & Vallabhapurapu, S. (2026) · Molecular Omics · doi:10.1093/momics/aaiaf004

MassID provides near complete annotation of metabolomics data with identification probabilitiesPreprint

Stancliffe, E., Gandhi, M., Guzior, D. V., Mehta, A., Acharya, S., Richardson, A. D., Cho, K., Cohen, T., & Patti, G. J. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.02.11.704864 · Cited by 1

UHPLC-Q-Orbitrap-HRMS metabolomics and molecular networking to assess non-thermal debittering of orange juice: Insights into compositional quality preservation

Rivera-Pérez, A., Pérez-León, L., Sobczuk, T. M., González, M. J. I., & Frenich, A. G. (2026) · Microchemical Journal · doi:10.1016/j.microc.2026.117504

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DOI 10.1007/s11306-007-0070-6 BRIEF REPORT The metabolomics standards initiative (MSI)

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