Cited by 109Microbial metabolism and enzyme functionEnzyme Structure and FunctionMetal-Catalyzed Oxygenation Mechanisms

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Quinohemoprotein alcohol dehydrogenases: structure, function, and physiology

Toyama, Hirohide, Mathews, F.Scott, Adachi, Osao, Matsushita, Kazunobu·2004·Archives of Biochemistry and Biophysics

Abstract

Quino(hemo)protein alcohol dehydrogenases (ADH) that have pyrroloquinoline quinone (PQQ) as the prosthetic group are classified into 3 groups, types I, II, and III. Type I ADH is a simple quinoprotein having PQQ as the only prosthetic group, while type II and type III ADHs are quinohemoprotein having heme c as well as PQQ in the catalytic polypeptide. Type II ADH is a soluble periplasmic enzyme and is widely distributed in Proteobacteria such as Pseudomonas, Ralstonia, Comamonas, etc. In contrast, type III ADH is a membrane-bound enzyme working on the periplasmic surface solely in acetic acid bacteria. It consists of three subunits that comprise a quinohemoprotein catalytic subunit, a triheme cytochrome c subunit, and a third subunit of unknown function. The catalytic subunits of all the quino(hemo)protein ADHs have a common structural motif, a quinoprotein-specific superbarrel domain, where PQQ is deeply embedded in the center. In addition, in the type II and type III ADHs this subunit contains a unique heme c domain. Various type II ADHs each have a unique substrate specificity, accepting a wide variety of alcohols, as is discussed on the basis of recent X-ray crystallographic analyses. Electron transfer within both type II and III ADHs is discussed in terms of the intramolecular reaction from PQQ to heme c and also from heme to heme, and in terms of the intermolecular reaction with azurin and ubiquinone, respectively. Unique physiological functions of both types of quinohemoprotein ADHs are also discussed.

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Research works printed but not linked: 49

  1. Matsushita, 2002, Appl. Microbiol. Biotechnol., 58, 13, 10.1007/s00253-001-0851-1 · DOI
  2. Matsushita, 1994, 36, 247
  3. Tachibana, 2003, FEMS Microbiol. Lett., 218, 345, 10.1111/j.1574-6968.2003.tb11540.x · DOI
  4. Asakura, 1999, Biosci. Biotechnol. Biochem., 62, 469
  5. Shibata, 2001, J. Biosic. Bioeng., 92, 524, 10.1016/S1389-1723(01)80310-8 · DOI
  6. Adachi, 2001, Biosci. Biotechnol. Biochem., 65, 2755, 10.1271/bbb.65.2755 · DOI
  7. Sugisawa, 2002, Biosci. Biotechnol. Biochem., 66, 57, 10.1271/bbb.66.57 · DOI
  8. Yamanaka, 1983, Agric. Biol. Chem., 47, 2173
  9. Yamanaka, 1991, Agric. Biol. Chem., 55, 837
  10. Yasuda, 1996, FEMS Microbiol. Lett., 138, 23, 10.1111/j.1574-6968.1996.tb08129.x · DOI
  11. Toyama, 1995, J. Bacteriol., 177, 2442, 10.1128/jb.177.9.2442-2450.1995 · DOI
  12. Vangnai, 2001, Microbiology, 147, 745, 10.1099/00221287-147-3-745 · DOI
  13. Vangnai, 2002, J. Bacteriol., 184, 1916, 10.1128/JB.184.7.1916-1924.2002 · DOI
  14. Vangnai, 2002, J. Bacteriol., 184, 4343, 10.1128/JB.184.16.4343-4350.2002 · DOI
  15. Hooper, 1998, Biochim. Biophys. Acta, 1383, 160, 10.1016/S0167-4838(97)00204-5 · DOI
  16. Adachi, 1998, Biosci. Biotechnol. Biochem., 62, 469, 10.1271/bbb.62.469 · DOI
  17. Takagi, 1999, Biochemistry, 38, 6935, 10.1021/bi9828268 · DOI
  18. Satoh, 2002, J. Biol. Chem., 277, 2830, 10.1074/jbc.M109090200 · DOI
  19. Datta, 2001, Proc. Natl. Acad. Sci. USA, 98, 14268, 10.1073/pnas.241429098 · DOI
  20. Adachi, 1978, Agric. Biol. Chem., 42, 2331
  21. Matsushita, 1992, Biosci. Biotechnol. Biochem., 56, 304, 10.1271/bbb.56.304 · DOI
  22. Kondo, 1995, J. Bacteriol., 177, 5048, 10.1128/jb.177.17.5048-5055.1995 · DOI
  23. Tayama, 1989, Appl. Microbiol. Biotechnol., 32, 181, 10.1007/BF00165885 · DOI
  24. Frebortova, 1997, Biosci. Biotechnol. Biochem., 61, 459, 10.1271/bbb.61.459 · DOI
  25. Matsushita, 1996, J. Biol. Chem., 271, 4850, 10.1074/jbc.271.9.4850 · DOI
  26. Shimao, 1986, Appl. Environ. Microbiol., 51, 268, 10.1128/AEM.51.2.268-275.1986 · DOI
  27. Shimao, 1996, Biosci. Biotechnol. Biochem., 60, 1056, 10.1271/bbb.60.1056 · DOI
  28. Ghosh, 1995, Structure, 3, 177, 10.1016/S0969-2126(01)00148-4 · DOI
  29. Xia, 1996, J. Mol. Biol., 259, 480, 10.1006/jmbi.1996.0334 · DOI
  30. Keitel, 2000, J. Mol. Biol., 297, 961, 10.1006/jmbi.2000.3603 · DOI
  31. Chen, 2002, Structure, 10, 837, 10.1016/S0969-2126(02)00774-8 · DOI
  32. Xia, 2003, J. Biol. Inorg. Chem., 8, 843, 10.1007/s00775-003-0485-0 · DOI
  33. Oubrie, 2002, J. Biol. Chem., 277, 3727, 10.1074/jbc.M109403200 · DOI
  34. Geerlof, 1994, Biosci. Biotechnol. Biochem., 58, 1028, 10.1271/bbb.58.1028 · DOI
  35. Schrover, 1993, Biochem. J., 290, 123, 10.1042/bj2900123 · DOI
  36. Reichmann, 1993, Biochem. J., 289, 173, 10.1042/bj2890173 · DOI
  37. Matsushita, 1999, Biochemistry, 38, 6111, 10.1021/bi990121f · DOI
  38. Sato, 2001, Biochem. J., 357, 893, 10.1042/bj3570893 · DOI
  39. Torimura, 1997, Chem. Lett., 525, 10.1246/cl.1997.525 · DOI
  40. de Jong, 1995, Biochemistry, 34, 9451, 10.1021/bi00029a021 · DOI
  41. de Jong, 1995, Eur. J. Biochem., 230, 899, 10.1111/j.1432-1033.1995.tb20634.x · DOI
  42. Allen, 2000, Nat. Struct. Biol., 7, 885, 10.1038/82821 · DOI
  43. Iwata, 1998, Science, 281, 64, 10.1126/science.281.5373.64 · DOI · Paper page
  44. Frebortova, 1998, Biochim. Biophys. Acta, 1363, 24, 10.1016/S0005-2728(97)00090-X · DOI
  45. Zarnt, 2001, J. Bacteriol., 183, 1954, 10.1128/JB.183.6.1954-1960.2001 · DOI
  46. Groen, 1986, Biochem. J., 234, 611, 10.1042/bj2340611 · DOI
  47. K. Matsushita, H. Toyama, O. Adachi, in: D. Zannoni (Ed.), Respiration in Archaea and Bacteria. Diversity of Prokaryotic Respiratory Systems, vol. 2, Kluwer Academic Publishers, The Netherlands, 2004 (in press)
  48. Chinnawirotpisan, 2003, J. Biosci. Bioeng., 96, 564, 10.1016/S1389-1723(04)70150-4 · DOI
  49. Görisch, 1989, Antonie van Leeuwenhoek, 56, 35, 10.1007/BF00822582 · DOI

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Metadata

Authors
Toyama, H., Mathews, F. S., Adachi, O., & Matsushita, K.
Affiliations
Yamaguchi University (JP)
Corresponding author
Matsushita, Kazunobu
Venue
Archives of Biochemistry and Biophysics
Publisher
Elsevier BV
Published
2004-08
Volume
428
Issue
1
Pages
10-21
ISSN
0003-9861 (ISSN-L)
OpenAlex
W2050010239
Cited by
109
References
0
Citations by year
2026: 2 · 2025: 5 · 2024: 3 · 2023: 3 · 2022: 3 · 2021: 6 · 2020: 3 · 2019: 5 · 2018: 9 · 2017: 8 · 2016: 3 · 2015: 4 · 2014: 5 · 2013: 5 · 2012: 4
FWCI
0.46
Type
journal article
Language
en
Open access
closed
Locations
  • Archives of Biochemistry and Biophysics (publishedVersion)
  • PubMed (publishedVersion)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Microbial metabolism and enzyme function
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Structural Biology › Enzyme Structure and Function
  • Physical Sciences › Chemistry › Inorganic Chemistry › Metal-Catalyzed Oxygenation Mechanisms
Keywords
pyrroloquinoline quinone, heme c, quinoproteins, substrate specificity, electron transfer, azurin, coenzyme Q10, periplasmic enzymes, membrane-bound enzyme, acetic acid bacteria, Pseudomonas, Proteobacteria, enzyme structure
MeSH terms
Alcohol Oxidoreductases, Alcohols, Amino Acid Sequence, Electron Transport, Enzyme Activation, Models, Molecular, Molecular Sequence Data, Oxidation-Reduction, Protein Conformation, Species Specificity, Structure-Activity Relationship, Sequence Homology, Amino Acid, Proteobacteria, PQQ Cofactor

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Toyama, H., Mathews, F. S., Adachi, O., & Matsushita, K. (2004). Quinohemoprotein alcohol dehydrogenases: structure, function, and physiology. Archives of Biochemistry and Biophysics. https://doi.org/10.1016/j.abb.2004.03.037