Plant biomass, soil microbial community structure and nitrogen cycling under different organic amendment regimes; a 15N tracer-based approach
Open accessAbstract
Sustainable agriculture requires nutrient management options that lead to a profitable crop yield with relatively low nitrogen (N) losses to the environment. We studied whether the addition of contrasting organic amendments together with inorganic fertilizer can promote both requirements simultaneously. In particular we studied how the chemical composition of organic amendments affects the biomass, activity and composition of the soil microbial community and subsequently carbon (C) and N mineralization, microbial N immobilization and plant growth and nutrient uptake.In a pot experiment, Brussels sprouts (Brassica oleracea, cvar. Cyrus) were grown on arable soil, mixed with 15N-labelled mineral fertilizer and different kinds of organic amendments (cattle manure solid fraction, maize silage, lucerne silage, wheat straw) differing in C:N ratio and lignin content. After 69 and 132days, destructive sampling took place to assess the effects of the different treatments on soil microbial biomass (microscopic measurements), microbial community composition (phospholipid fatty acid profiles), soil microbial activity (14C-leucine incorporation), C and N mineralization, plant biomass and 15N retrieval in soil pools, microbial biomass and plant biomass.Addition of organic amendments increased soil microbial biomass, activity and fungal/bacterial ratio and created distinct microbial community compositions, whereby high C:N ratio organic amendments had stronger effects compared to low C:N ratio amendments. Structural equation modelling showed that higher values of soil microbial activity were associated with increased N mineralization rates, increased plant biomass and plant 15N uptake, while microbial 15N immobilization was associated with soil microbial community composition.The outcomes of this study highlight the importance of the chemical composition and the amount of the organic amendments for finding a balance between plant N uptake, microbial N immobilization and N retention in labile and stable soil pools through the effects on the composition and activity of the soil microbial community. The results provide insights that can be used in designing combined input (nutrient and organic) nutrient management strategies for a more sustainable agriculture.
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Despite low fungal biomass, intensively managed arable soils harbour a diverse seed bank of fungal saprotrophs, which efficiently respond to new inputs of organic substrates.
“Despite the low fungal biomass, intensively managed arable soils harbour a diverse seed bank of fungal saprotrophs (de Graaff et al., 2019), which efficiently respond to new inputs of organic substrates (van der Wal et al., 2006b;Heijboer et al., 2016).”
From The hidden potential of saprotrophic fungi in arable soil: Patterns of short-term stimulation by organic amendments (2020) · cites this paper as Heijboer et al., 2016
In the field situation, depletion of soil mineral nitrogen by C-rich amendments could lead to N deficiency for crops.
“In the field situation this could lead to N deficiency for crops (Mohanty et al., 2013;Heijboer et al., 2016).”
From The hidden potential of saprotrophic fungi in arable soil: Patterns of short-term stimulation by organic amendments (2020) · cites this paper as Heijboer et al., 2016
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<b>lavaan</b> : An <i>R</i> Package for Structural Equation Modeling
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Clocchiatti, A., Hannula, S. E., van den Berg, M., Korthals, G., & de Boer, W. (2020) · Applied Soil Ecology · doi:10.1016/j.apsoil.2019.103434 · Cited by 147 · see citing works
- Authors
- Heijboer, A., ten Berge, H. F. M., de Ruiter, P. C., Jørgensen, H. B., Kowalchuk, G. A., & Bloem, J.
- Affiliations
- Utrecht University (NL)
- Lund University (SE)
- Wageningen University & Research (NL)
- Corresponding author
- Heijboer, Amber
- Venue
- Applied Soil Ecology
- Publisher
- Elsevier BV
- Published
- 2016-11
- Volume
- 107
- Pages
- 251-260
- ISSN
- 0929-1393 (ISSN-L)
- OpenAlex
- W2466425471
- Cited by
- 100
- References
- 4
- Citations by year
- 2026: 7 · 2025: 9 · 2024: 10 · 2023: 10 · 2022: 15 · 2021: 9 · 2020: 11 · 2019: 14 · 2018: 12 · 2017: 3
- FWCI
- 11.31
- Type
- journal article
- Language
- en
- Open access
- green
- research.wur.nl
- Locations
- Applied Soil Ecology (publishedVersion)
- Socio-Environmental Systems Modeling (acceptedVersion)
- UvA-DARE (University of Amsterdam) (submittedVersion)
- Utrecht University Repository (Utrecht University) (submittedVersion)
- Lund University Publications (Lund University) (submittedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion)
- Funders
- Netherlands Organization for Scientific Research
- Dutch Ministry of Economic Affairs (TKI-AF-12054A)
- European Commission under the CATCH-C project (289782)
- Netherlands Ministry of Economic Affairs
- Topics
- Life Sciences › Agricultural and Biological Sciences › Soil Science › Soil Carbon and Nitrogen Dynamics
- Life Sciences › Agricultural and Biological Sciences › Soil Science › Agricultural Science and Fertilization
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Agriculture, Plant Science, Crop Management
- Keywords
- organic amendments, soil microbial communities, nitrogen cycling, 15N tracer, nitrogen mineralization, microbial nitrogen immobilization, soil microbial biomass, C/N ratio, lignin content, cattle manure, corn silage, alfalfa silage, wheat straw, Brussels sprouts, phospholipid fatty acids, 14C-leucine incorporation, plant nitrogen uptake, nitrogen retention, nutrient management, arable soils
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