Cited by 225Genetics and Neurodevelopmental DisordersGenomics and Rare DiseasesGenetic Neurodegenerative Diseases

An AT-hook domain in MeCP2 determines the clinical course of Rett syndrome and related disorders

Open access
Baker, Steven Andrew, Chen, Lin, Wilkins, Angela Dawn, Yu, Peng, Lichtarge, Olivier, Zoghbi, Huda Yahya·2013·Cell

Abstract

Mutations in the X-linked MECP2 cause Rett syndrome, a devastating neurological disorder typified by a period of apparently normal development followed by loss of cognitive and psychomotor skills. Data from rare male patients suggest symptom onset and severity can be influenced by the location of the mutation, with amino acids 270 and 273 marking the difference between neonatal encephalopathy and death, on the one hand, and survival with deficits on the other. We therefore generated two mouse models expressing either MeCP2-R270X or MeCP2-G273X. The mice developed phenotypes at strikingly different rates and showed differential ATRX nuclear localization within the nervous system, over time, coinciding with phenotypic progression. We discovered that MeCP2 contains three AT-hook-like domains over a stretch of 250 amino acids, like HMGA DNA-bending proteins; one conserved AT-hook is disrupted in MeCP2-R270X, lending further support to the notion that one of MeCP2's key functions is to alter chromatin structure.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/j.cell.2013.01.038

Cites

4 of 4 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • MeCP2 may also facilitate transcriptional activation, chromatin compaction and mRNA splicing, while interacting with other regulatory proteins.

    “However, MeCP2 may also facilitate transcriptional activation [77], chromatin compaction [78,79] and mRNA splicing [80,81], while also interacting with a host of other regulatory proteins involved in a variety of molecular pathways [81–84].”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 39

  1. Amir RE Van den Veyver IB Wan M Tran CQ Francke U Zoghbi HY 1999 Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2 Nat Genet 23 185 188 10508514
  2. Ankit Agrawal XH 2011 Pairwise Statistical Significance of Local Sequence Alignment Using Sequence-Specific and Position-Specific Substitution Matrices IEEE/ACM Transactions on Computational Biology and Bioinformatics 8 194 205 21071807
  3. Ben-Shachar S Chahrour M Thaller C Shaw CA Zoghbi HY 2009 Mouse models of MeCP2 disorders share gene expression changes in the cerebellum and hypothalamus Human Molecular Genetics 18 2431 2442 19369296 PMC2694691
  4. Brocher J Vogel B Hock R 2010 HMGA1 down-regulation is crucial for chromatin composition and a gene expression profile permitting myogenic differentiation BMC Cell Biology 11 64 20701767 PMC2928187
  5. Catez F Ueda T Bustin M 2006 Determinants of histone H1 mobility and chromatin binding in living cells Nat Struct Mol Biol 13 305 310 16715048 PMC3730444
  6. Chahrour M Zoghbi HY 2007 The Story of Rett Syndrome: From Clinic to Neurobiology Neuron 56 422 437 17988628
  7. Chang Q Khare G Dani V Nelson S Jaenisch R 2006 The Disease Progression of Mecp2 Mutant Mice Is Affected by the Level of BDNF Expression Neuron 49 341 348 16446138
  8. Collins AL Levenson JM Vilaythong AP Richman R Armstrong DL Noebels JL David Sweatt J Zoghbi HY 2004 Mild overexpression of MeCP2 causes a progressive neurological disorder in mice Human Molecular Genetics 13 2679 2689 15351775
  9. Drané P Ouararhni K Depaux A Shuaib M Hamiche A 2010 The death-associated protein DAXX is a novel histone chaperone involved in the replication-independent deposition of H3.3 Genes & Development 24 1253 1265 20504901 PMC2885661
  10. Free A Wakefield RID Smith BO Dryden DTF Barlow PN Bird AP 2001 DNA Recognition by the Methyl-CpG Binding Domain of MeCP2 Journal of Biological Chemistry 276 3353 3360 11035019
  11. Fyffe SL Neul JL Samaco RC Chao HT Ben-Shachar S Moretti P McGill BE Goulding EH Sullivan E Tecott LH 2008 Deletion of Mecp2 in Sim1-Expressing Neurons Reveals a Critical Role for MeCP2 in Feeding Behavior, Aggression, and the Response to Stress Neuron 59 947 958 18817733 PMC2597031
  12. Garrick D Sharpe JA Arkell R Dobbie L Smith AJH Wood WG Higgs DR Gibbons RJ 2006 Loss of Atrx Affects Trophoblast Development and the Pattern of X-Inactivation in Extraembryonic Tissues PLoS Genet 2 e58 16628246 PMC1440874
  13. Ghosh RP Nikitina T Horowitz-Scherer RA Gierasch LM Uversky VN Hite K Hansen JC Woodcock CL 2010 Unique Physical Properties and Interactions of the Domains of Methylated DNA Binding Protein 2 Biochemistry 49 4395 4410 20405910 PMC2872689
  14. Gibbons RJ Higgs DR 2000 Molecular–clinical spectrum of the ATR-X syndrome American Journal of Medical Genetics 97 204 212 11449489
  15. Goldberg AD Banaszynski LA Noh KM Lewis PW Elsaesser SJ Stadler S Dewell S Law M Guo X Li X 2010 Distinct Factors Control Histone Variant H3.3 Localization at Specific Genomic Regions Cell 140 678 691 20211137 PMC2885838
  16. Guy J Gan J Selfridge J Cobb S Bird A 2007 Reversal of Neurological Defects in a Mouse Model of Rett Syndrome Science 315 1143 1147 17289941 PMC7610836
  17. Guy J Hendrich B Holmes M Martin JE Bird A 2001 A mouse Mecp2-null mutation causes neurological symptoms that mimic Rett syndrome Nat Genet 27 322 326 11242117
  18. Iwase S Xiang B Ghosh S Ren T Lewis PW Cochrane JC Allis CD Picketts DJ Patel DJ Li H 2011 ATRX ADD domain links an atypical histone methylation recognition mechanism to human mental-retardation syndrome Nat Struct Mol Biol 18 769 776 21666679 PMC3130887
  19. Kankirawatana P Leonard H Ellaway C Scurlock J Mansour A Makris CM Dure LS Friez M Lane J Kiraly-Borri C 2006 Early progressive encephalopathy in boys and MECP2 mutations Neurology 67 164 166 16832102
  20. Klose RJ Sarraf SA Schmiedeberg L McDermott SM Stancheva I Bird AP 2005 DNA Binding Selectivity of MeCP2 Due to a Requirement for A/T Sequences Adjacent to Methyl-CpG Molecular Cell 19 667 678 16137622
  21. Law MJ Lower KM Voon HPJ Hughes JR Garrick D Viprakasit V Mitson M De Gobbi M Marra M Morris A 2010 ATR-X Syndrome Protein Targets Tandem Repeats and Influences Allele-Specific Expression in a Size-Dependent Manner Cell 143 367 378 21029860
  22. Lewis JD Meehan RR Henzel WJ Maurer-Fogy I Jeppesen P Klein F Bird A 1992 Purification, sequence, and cellular localization of a novel chromosomal protein that binds to Methylated DNA Cell 69 905 914 1606614
  23. Li L Yoder K Hansen MST Olvera J Miller MD Bushman FD 2000 Retroviral cDNA Integration: Stimulation by HMG I Family Proteins Journal of Virology 74 10965 10974 11069991 PMC113176
  24. McGill BE Bundle SF Yaylaoglu MB Carson JP Thaller C Zoghbi HY 2006 Enhanced anxiety and stress-induced corticosterone release are associated with increased Crh expression in a mouse model of Rett syndrome Proceedings of the National Academy of Sciences 103 18267 18272 PMC1636379 17108082
  25. Nan X Campoy FJ Bird A 1997 MeCP2 Is a Transcriptional Repressor with Abundant Binding Sites in Genomic Chromatin Cell 88 471 481 9038338
  26. Nan X Hou J Maclean A Nasir J Lafuente MJ Shu X Kriaucionis S Bird A 2007 Interaction between chromatin proteins MECP2 and ATRX is disrupted by mutations that cause inherited mental retardation Proceedings of the National Academy of Sciences 104 2709 2714 PMC1796997 17296936
  27. Nan X Ng HH Johnson CA Laherty CD Turner BM Eisenman RN Bird A 1998 Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex Nature 393 386 389 9620804
  28. Nikitina T Ghosh RP Horowitz-Scherer RA Hansen JC Grigoryev SA Woodcock CL 2007a MeCP2-Chromatin Interactions Include the Formation of Chromatosome-like Structures and Are Altered in Mutations Causing Rett Syndrome Journal of Biological Chemistry 282 28237 28245 17660293
  29. Nikitina T Shi X Ghosh RP Horowitz-Scherer RA Hansen JC Woodcock CL 2007b Multiple Modes of Interaction between the Methylated DNA Binding Protein MeCP2 and Chromatin Molecular and Cellular Biology 27 864 877 17101771 PMC1800686
  30. Ravn K Nielsen JB Uldall P Hansen FJ Schwartz M 2003 No correlation between phenotype and genotype in boys with a truncating MECP2 mutation Journal of Medical Genetics 40 e5 12525553 PMC1735260
  31. Reeves R 2010 Nuclear functions of the HMG proteins Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1799 3 14 PMC2818135 19748605
  32. Ritchie K Seah C Moulin J Isaac C Dick F Bérubé NG 2008 Loss of ATRX leads to chromosome cohesion and congression defects The Journal of Cell Biology 180 315 324 18227278 PMC2213576
  33. Samaco RC Mandel-Brehm C McGraw CM Shaw CA McGill BE Zoghbi HY 2012 Crh and Oprm1 mediate anxiety-related behavior and social approach in a mouse model of MECP2 duplication syndrome Nat Genet 44 206 211 22231481 PMC3267865
  34. Schüle B Armstrong DD Vogel H Oviedo A Francke U 2008 Severe congenital encephalopathy caused by MECP2 null mutations in males: central hypoxia and reduced neuronal dendritic structure Clinical Genetics 74 116 126 18477000
  35. Schwarz PM Felthauser A Fletcher TM Hansen JC 1996 Reversible Oligonucleosome Self-Association:ý Dependence on Divalent Cations and Core Histone Tail Domains† Biochemistry 35 4009 4015 8672434
  36. Skene PJ Illingworth RS Webb S Kerr ARW James KD Turner DJ Andrews R Bird AP 2010 Neuronal MeCP2 Is Expressed at Near Histone-Octamer Levels and Globally Alters the Chromatin State Molecular Cell 37 457 468 20188665 PMC4338610
  37. Turner B 2001 ChIP with Native Chromatin: Advantages and Problems Relative to Methods Using Cross-Linked Material Paris Institut national de la santé et de la recherche médicale (INSERM) 21413358
  38. Venancio M Santos M Pereira SA Maciel P Saraiva JM 2007 An explanation for another familial case of Rett syndrome: maternal germline mosaicism Eur J Hum Genet 15 902 904 17440498
  39. Villard L 2007 MECP2 mutations in males Journal of Medical Genetics 44 417 423 17351020 PMC2597995

Cited by

Sorted by citations

Authors
Baker, S. A., Chen, L., Wilkins, A. D., Yu, P., Lichtarge, O., & Zoghbi, H. Y.
Affiliations
  • Baylor College of Medicine (US)
  • Howard Hughes Medical Institute (US)
Corresponding author
Zoghbi, Huda Yahya
Venue
Cell
Publisher
Elsevier BV
Published
2013-02
Volume
152
Issue
5
Pages
984-996
ISSN
0092-8674 (ISSN-L)
OpenAlex
W2001420461
Cited by
225
References
4
Citations by year
2026: 8 · 2025: 5 · 2024: 13 · 2023: 9 · 2022: 12 · 2021: 17 · 2020: 15 · 2019: 14 · 2018: 24 · 2017: 18 · 2016: 21 · 2015: 21 · 2014: 22 · 2013: 19
FWCI
18.36
Type
journal article
Language
en
Open access
Locations
  • Cell (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
Funders
  • Howard Hughes Medical Institute
  • National Institute of General Medical Sciences (R01GM079656)
  • National Institute of Neurological Disorders and Stroke (F30NS066527, NS053862, P01NS053862, R01NS057819)
  • Eunice Kennedy Shriver National Institute of Child Health and Human Development (HD 024064, P30HD024064)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomics and Rare Diseases
  • Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Genetic Neurodegenerative Diseases
Keywords
Rett syndrome, MeCP2, mouse model, clinical course, neonatal encephalopathy, chromatin structure, X-linked disorders, mutation location
MeSH terms
X-linked Nuclear Protein, Amino Acid Sequence, Animals, Disease Models, Animal, DNA Helicases, Female, Heterochromatin, Male, Mice, Transgenic, Molecular Sequence Data, Nuclear Proteins, Transcription, Genetic, Rett Syndrome, Sequence Alignment, Protein Structure, Tertiary, Mice, Knockout, Mice, Methyl-CpG-Binding Protein 2

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review