The Mammalian Ribo-interactome Reveals Ribosome Functional Diversity and Heterogeneity

Simsek, Deniz, Tiu, Gerald C., Flynn, Ryan A., Byeon, Gun W., Leppek, Kathrin, Xu, Adele F., Chang, Howard Y., Barna, Maria·2017·Cell

DOI 10.1016/j.cell.2017.05.022

Cited by (448)

Items 201–300 of 448

Bacterial RF3 Senses Chaperone Function in Co-Translational Folding
Liang Zhao, Marie‐Pierre Castanié‐Cornet, Sneha Kumar, Pierre Genevaux, Manajit K. Hayer-Hartl, F. Ulrich Hartl · 2020 · Molecular Cell
The Human Fragile X Mental Retardation Protein Inhibits the Elongation Step of Translation through Its RGG and C-Terminal Domains
Youssi M. Athar, Simpson Joseph · 2020 · Biochemistry
RNA G-quadruplexes control mitochondria-localized mRNA translation and energy metabolism
Leïla Dumas, Sauyeun Shin, Quentin Rigaud, Marie Cargnello, Beatriz Hernández Suárez, Pauline Herviou, Nathalie Saint‐Laurent, Marjorie Leduc, Morgane Le Gall, David Monchaud et al. · 2025 · Nature Communications
Deletion of ribosomal paralogs Rpl39 and Rpl39l compromises cell proliferation via protein synthesis and mitochondrial activity
Qianxing Zou, Huayu Qi · 2021 · The International Journal of Biochemistry & Cell Biology
Cyclin-Dependent Kinase 5 Regulatory Subunit Associated Protein 3: Potential Functions and Implications for Development and Disease
Linna Sheng, Jiaxuan Li, Shengfang Rao, Zhijun Yang, Yonghong Huang · 2021 · Frontiers in Oncology
Identification of RPL15 60S Ribosomal Protein as a Novel Topotecan Target Protein That Correlates with DAMP Secretion and Antitumor Immune Activation
Shunsuke Yamada, Yuichi Kitai, Takashi Tadokoro, Runa Takahashi, Haruka Shoji, Taiga Maemoto, Marie Ishiura, Ryuta Muromoto, Jun‐ichi Kashiwakura, Ken J. Ishii et al. · 2022 · The Journal of Immunology
mTOR-regulated U2af1 tandem exon splicing specifies transcriptome features for translational control
Jae-Woong Chang, Hsin-Sung Yeh, Meeyeon Park, Luke N. Erber, Jiao Sun, Sze Lok Alfred Cheng, Alexander M Bui, Naima Ahmed Fahmi, Ryan A. Nasti, Rui Kuang et al. · 2019 · Nucleic Acids Research
The Expanding Riboverse
Sergey O. Sulima, Jonathan D. Dinman · 2019 · Cells
Global Profiling of the Lysine Crotonylome in Different Pluripotent States
Yuan Lv, Chen Bu, Jin Meng, Carl Ward, Giacomo Volpe, Jieyi Hu, Mengling Jiang, Lin Guo, Jiekai Chen, Miguel Angel Esteban et al. · 2021 · Genomics Proteomics & Bioinformatics
Small molecules as tools for functional assessment of deubiquitinating enzyme function
Robert S. Magin, Xiaoxi Liu, Alejandra Felix, Ariana S. Bratt, Wai Cheung Chan, Sara J. Buhrlage · 2021 · Cell chemical biology
UFMylation regulates translational homeostasis and cell cycle progression
Igor A. Gak, Djordje Vasiljević, Thomas Zerjatke, Lu Yu, Mario Brosch, Theodoros I. Roumeliotis, Cindy Horenburg, Nancy Klemm, Gábor Bakos, Alexander Herrmann et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
Ribosome association inhibits stress-induced gene mRNA localization to stress granules
Noah S. Helton, Benjamin J. T. Dodd, Stephanie L. Moon · 2025 · Genes & Development
The UFM1 conjugation system in mammalian development
Shuchun Yang, Nathan Moy, Rui Yang · 2023 · Developmental Dynamics
Selective recruitment of stress-responsive mRNAs to ribosomes for translation by acetylated protein S1 during nutrient stress in Escherichia coli
Baiqing Zhang, Zong-Qin Chen, Yu‐Qi Dong, Di You, Ying Qian Zhou, Bang‐Ce Ye · 2022 · Communications Biology
Specialized ribosomes: integrating new insights and current challenges
Alan J. S. Beavan, Veronica Thuburn, Bulat F. Fatkhullin, Joanne Cunningham, Tayah S. Hopes, Ella Dimascio, Tessa Chan, Nan Jing Zhao, Karl Norris, Chalmers Chi Cheng Chau et al. · 2025 · Philosophical Transactions of the Royal Society B Biological Sciences
The UFM1 Pathway Impacts HCMV US2-Mediated Degradation of HLA Class I
A.B.C. Schuren, Ingrid G. J. Boer, Ellen M. Bouma, Michael L. van de Weijer, Ana I. Costa, Philipp Hubel, Andreas Pichlmair, Robert Jan Lebbink, Emmanuel J. H. J. Wiertz · 2021 · Molecules
Run, Ribosome, Run: From Compromised Translation to Human Health
Anna Vind, Goda Snieckute, Simon Bekker‐Jensen, Melanie Blasius · 2023 · Antioxidants and Redox Signaling
The RNA-Binding Function of Ribosomal Proteins and Ribosome Biogenesis Factors in Human Health and Disease
Caterina Catalanotto, Christian Barbato, Carlo Cogoni, Dario Benelli · 2023 · Biomedicines
Ribosome inactivation regulates translation elongation in neurons
Bastian Popper, Martina Bürkle, Giuliana Ciccopiedi, Marta Marchioretto, Ignasi Forné, Axel Imhof, Tobias Straub, Gabriella Viero, Magdalena Götz, Rico Schieweck · 2024 · Journal of Biological Chemistry
Implication of ribosomal protein in abiotic and biotic stress
Zainab Fakih, Hugo Germain · 2025 · Planta
Proteomics-based characterization of ribosome heterogeneity in adult mouse organs
2025
Unveiling the regulatory role of GRP7 in ABA signal-mediated mRNA translation efficiency regulation
Jing Zhang, Wenna Shao, Yongxin Xu, Fa’an Tian, Jinchao Chen, Dongzhi Wang, Xuelei Lin, Chongsheng He, Xiaofei Yang, Dorothee Staiger et al. · 2025 · Nature Communications
A translational program that suppresses metabolism to shield the genome
Nathan C. Balukoff, J.J.David Ho, Phaedra R. Theodoridis, Miling Wang, Michael Bokros, Lis Llanio, Jonathan R. Krieger, Jonathan Harry Schatz, Stephen Lee · 2020 · Nature Communications
Insights Into Translatomics in the Nervous System
Shuxia Zhang, Yeru Chen, Yongjie Wang, Piao Zhang, Gang Chen, Youfa Zhou · 2020 · Frontiers in Genetics
Super-Resolution Mass Spectrometry Enables Rapid, Accurate, and Highly Multiplexed Proteomics at the MS2 Level
Anton N. Kozhinov, Alex N. T. Johnson, Konstantin O. Nagornov, Michael Stadlmeier, Lance Martin, Loı̈c Dayon, John Corthésy, Martin Wühr, Yury O. Tsybin · 2023 · Analytical Chemistry
Identification of a heterogeneous and dynamic ciliome during embryonic development and cell differentiation
Kelsey H. Elliott, Sai K. Balchand, Christian Louis Bonatto Paese, Ching‐Fang Chang, Yanfen Yang, Kari M. Brown, Daniel T. Rasicci, Hao He, Konrad Thorner, Praneet Chaturvedi et al. · 2023 · Development
Principles, challenges, and advances in ribosome profiling: from bulk to low-input and single-cell analysis
Qiuyi Wang, Yuanhui Mao · 2023 · Advanced Biotechnology
Ageing-associated long non-coding RNA extends lifespan and reduces translation in non-dividing cells
Shajahan Anver, Ahmed Faisal Sumit, Xi-Ming Sun, Abubakar A. Hatimy, Konstantinos Thalassinos, Samuel Marguerat, Nazif Alic, Jürg Bähler · 2024 · EMBO Reports
Proteomic and mechanistic dissection of the poxvirus-customized ribosome
Stephen DiGiuseppe, Madeline G. Rollins, Helen Astar, Natalia Khalatyan, Jeffrey N. Savas, Derek Walsh · 2020 · Journal of Cell Science
Ribosomal RACK1 Regulates the Dendritic Arborization by Repressing FMRP Activity
Nicla Romano, Bruna Di Giacomo, Veronica Nobile, Antonella Borreca, Daniela Willems, Francesca Tilesi, Elisabetta Catalani, Manasi Agrawal, Kristy Welshhans, Sara Ricciardi et al. · 2022 · International Journal of Molecular Sciences
Ddx56 maintains proliferation of mouse embryonic stem cells via ribosome assembly and interaction with the Oct4/Sox2 complex
Jingwen Wang, Jiahui Liu, Miaoman Ye, Feng Liu, Su Wu, Junjiu Huang, Guang W. Shi · 2020 · Stem Cell Research & Therapy
Ribo-ODDR : oligo design pipeline for experiment-specific rRNA depletion in Ribo-seq
Ferhat Alkan, Joana Silva, Eric Pintó Barberà, William J. Faller · 2021 · Bioinformatics
What Genetics Has Told Us and How It Can Inform Future Experiments for Spinal Muscular Atrophy, a Perspective
Anton J. Blatnik, Vicki L. McGovern, Arthur H.M. Burghes · 2021 · International Journal of Molecular Sciences
Ribosome Specialization in Protozoa Parasites
Cristian Camilo Rodríguez-Almonacid, Morgana K. Kellogg, Andrey L. Karamyshev, Zemfira N. Karamysheva · 2023 · International Journal of Molecular Sciences
Znf598-mediated Rps10/eS10 ubiquitination contributes to the ribosome ubiquitination dynamics during zebrafish development
Nozomi Ugajin, Koshi Imami, Hiraku Takada, Yasushi Ishihama, Shinobu Chiba, Yuichiro Mishima · 2023 · RNA
Functional screen identifies RBM42 as a mediator of oncogenic mRNA translation specificity
Joanna R. Kovalski, Goksu Sarioglu, Vishvak Subramanyam, Grace A. Hernandez, Gilles Rademaker, Juan A. Osés-Prieto, Macey J. Slota, Nimmy Mohan, Kaylee Yiakis, Isabelle Liu et al. · 2025 · Nature Cell Biology
A versatile toolbox for determining IRES activity in cells and embryonic tissues
Philipp Koch, Zijian Zhang, Naomi R. Genuth, Teodorus Theo Susanto, Martin Haimann, Alena Khmelinskaia, Gun Woo Byeon, Saurabh Dey, Maria Barna, Kathrin Leppek · 2025 · The EMBO Journal
JNK activation induced by ribotoxic stress is initiated from 80S monosomes but not polysomes
Tae Sung Kim, Hag Dong Kim, Yong Jun Park, EunBin Kong, Hee Woong Yang, Youjin Jung, YongJoong Kim, Joon Kim · 2019 · BMB Reports
Cytoplasmic regulation of chloroplast ROS accumulation during effector-triggered immunity
Jianbin Su, Walter Gassmann · 2023 · Frontiers in Plant Science
Reprogramming the translatome during daily light transitions as affected by cytosolic glyceraldehyde-3-phosphate dehydrogenases GAPC1/C2
Melanie Wegener, Marcus Persicke, Karl‐Josef Dietz · 2023 · Journal of Experimental Botany
UBXN1 maintains ER proteostasis and represses UPR activation by modulating translation
Brittany A. Ahlstedt, Rakesh Ganji, Sirisha Mukkavalli, João A. Paulo, Steven P. Gygi, Malavika Raman · 2024 · EMBO Reports
Mechanisms of adaptation and evolution in Toxoplasma gondii
Sergio Oscar Angel, Laura Vanagas, Andrés M. Alonso · 2024 · Molecular and Biochemical Parasitology
The rRNA epitranscriptome and myonuclear SNORD landscape in skeletal muscle fibers contributes to ribosome heterogeneity and is altered by a hypertrophic stimulus
Minying Cui, Paulo R. Jannig, Maral Halladjian, Vandré C. Figueiredo, Yuan Wen, Ivan J. Vechetti, Nicolai Krogh, Baptiste Jude, Sebastian Edman, Johanna T. Lanner et al. · 2024 · American Journal of Physiology-Cell Physiology
Impacts of ribosomal RNA sequence variation on gene expression and phenotype
Griffin A. Welfer, Ryan A. Brady, S. Kundhavai Natchiar, Zoe L. Watson, Emily J. Rundlet, Jose L. Alejo, Anand Pratap Singh, Nitish K. Mishra, Roger B. Altman, Scott C. Blanchard · 2025 · Philosophical Transactions of the Royal Society B Biological Sciences
Improved yield of rhEPO in CHO cells with synthetic 5′ UTR
Alan Costello, Nga Thi Lao, Niall Barron, MARTIN M. CLYNES · 2018 · Biotechnology Letters
Eukaryotic Elongation Factor 3 Protects Saccharomyces cerevisiae Yeast from Oxidative Stress
Karolina Gościńska, Somayeh Shahmoradi Ghahe, Sara Domogała, Ulrike Topf · 2020 · Genes
Exploiting codon usage identifies intensity-specific modifiers of Ras/MAPK signaling in vivo
Jessica K. Sawyer, Zahra Kabiri, Ruth A. Montague, Scott R. Allen, Rebeccah K. Stewart, Sarah V. Paramore, Erez Cohen, Hamed Zaribafzadeh, Christopher M. Counter, Donald T. Fox · 2020 · PLoS Genetics
Translation-dependent and -independent mRNA decay occur through mutually exclusive pathways defined by ribosome density during T cell activation
Blandine C. Mercier, Emmanuel Labaronne, David Cluet, Laura Guiguettaz, Nicolas Fontrodona, Alicia A. Bicknell, Antoine Corbin, Mélanie Wencker, Fabien Aubé, Laurent Modolo et al. · 2024 · Genome Research
Giant DNA viruses encode a hallmark translation initiation complex of eukaryotic life
J. Maximilian Fels, Aidan B. Hill, Richard Han, Jasmine M. Garcia, Hugo Bisio, Chantal Abergel, Philip J. Kranzusch, Amy S.Y. Lee · 2026 · Cell
The SMN-ribosome interplay: a new opportunity for Spinal Muscular Atrophy therapies
Gaurav Sharma, Martina Paganin, Fabio Lauria, Elena Perenthaler, Gabriella Viero · 2024 · Biochemical Society Transactions
Bidirectional sequestration between a bacterial hibernation factor and a glutamate metabolizing protein
David Ranava, Christopher M. Scheidler, Martin Pfanzelt, Michaela K. Fiedler, Stephan A. Sieber, Sabine Schneider, Mee-Ngan Frances Yap · 2022 · Proceedings of the National Academy of Sciences
Coordination between MIDASIN 1 -mediated ribosome biogenesis and auxin modulates plant development
Ke Li, Ximeng Zhou, Xueping Sun, Guanghui Li, Lei Hou, Shuzhen Zhao, Chuanzhi Zhao, Changle Ma, Pengcheng Li, Xingjun Wang · 2021 · Journal of Experimental Botany
Intact ribosomes drive the formation of protein quinary structure
Leonard Breindel, Jian-Chao Yu, David S. Burz, Alexander G. Shekhtman · 2020 · PLoS ONE
The Inescapable Effects of Ribosomes on In-Cell NMR Spectroscopy and the Implications for Regulation of Biological Activity
David S. Burz, Leonard Breindel, Alexander G. Shekhtman · 2019 · International Journal of Molecular Sciences
Pan-cellular organelles and suborganelles—from common functions to cellular diversity?
Rico Schieweck, Magdalena Götz · 2024 · Genes & Development
Translation and protein synthesis in the chloroplast
Felix Willmund, Charles R. Hauser, William Zerges · 2023 · Elsevier eBooks
UFMylation safeguards human hepatocyte differentiation and liver homeostasis by regulating ribosome dissociation
Shuchun Yang, Li Wang, Ran Gao, Yanchang Li, Duo Zhang, Chenxi Wang, Guang Liu, Jie Na, Ping Xu, Xiaoyue Wang et al. · 2025 · Cell Reports
Orchestrating Neural Development Through mRNA Translation Regulation
Brandon Rodrigue, Mathew Sajish, Natalina Salmaso, Argel Aguilar‐Valles · 2025 · Journal of Neurochemistry
Phosphorylation of T897 in the dimerization domain of Gemin5 modulates protein interactions and translation regulation
Rosario Francisco-Velilla, Azman Embarc-Buh, Salvador Abellan, F. del Caño-Ochoa, S. Ramón-Maiques, E. Martínez-Salas · 2022 · Computational and Structural Biotechnology Journal
Ribosomal flavours: An acquired taste for specific mRNAs?
Bates, Christian, Hubbard, Simon J., Ashe, Mark P. · 2018 · Biochemical Society Transactions
O-GlcNAcylation of ribosome-associated proteins is concomitant with translational reprogramming during proteotoxic stress
Quira Zeidan, Jie L. Tian, Junfeng Ma, Farzad Eslami, Gerald Warren Hart · 2024 · Journal of Biological Chemistry
OASL enhances mRNA translation and reprograms lipid metabolism to promote cancer progression
Shi-Bing Li, Li Yuan, Qianying Zhu, Gong Zhang, Yuan-Tao Liu, Minghui Gao, Fei Han, Zhi-Rui Lin, Hua Zhang, Lin‐Quan Tang et al. · 2025 · Cell Reports
A Duality of Function: An Integrative Model of RACK1 as a Switch Between Translational and Signaling Hubs
Peter M. Kolosov, Nikita Biziaev, Elena Z. Alkalaeva · 2025 · International Journal of Molecular Sciences
Efficient and Rapid Analysis of Polysomes and Ribosomal Subunits in Cells and Tissues Using Ribo Mega-SEC
Harunori Yoshikawa, Ramasubramanian Sundaramoorthy, Daniel Mariyappa, Hao Jiang, Angus I. Lamond · 2021 · BIO-PROTOCOL
tRNA Synthetases Are Recruited to Yeast Ribosomes by rRNA Expansion Segment 7L but Do Not Require Association for Functionality
Nina Krauer, Robert Rauscher, Norbert Polacek · 2021 · Non-Coding RNA
The Importance of Being RNA-est: considering RNA-mediated ribosome plasticity
Christian Trahan, Marlene Oeffinger · 2023 · RNA Biology
The 18S rRNA methyltransferase DIMT-1 regulates lifespan in the germline later in life
M. Hafiz Rothi, Gautam Chandra Sarkar, Joseph Al Haddad, Wayne Mitchell, Kejun Ying, Nancy K. Pohl, Roberto G. Sotomayor-Mena, Julia Natale, Scarlett Dellacona, Vadim N. Gladyshev et al. · 2025 · Nature Communications
Targeting Translation Activity at the Ribosome Interface with UV-Active Small Molecules
Divya T. Kandala, Alessia Del Piano, L. Minati, Massimiliano Clamer · 2019 · ACS Omega
Introductory Chapter: A Brief Overview of Transcriptional and Post-transcriptional Regulation
Kaïs Ghedira · 2018 · InTech eBooks
Comprehensive Genome-Wide Approaches to Activity-Dependent Translational Control in Neurons
Han Kyoung Choe, Jun Cho · 2020 · International Journal of Molecular Sciences
Bloody Mysteries of Ribosomes
Sergey O. Sulima, Kim De Keersmaecker · 2018 · HemaSphere
Bacterial ribosome heterogeneity facilitates rapid response to stress
Yi‐Lin Shen, Lei Xu, Ying Qian Zhou, Bang‐Ce Ye · 2025 · Journal of Bacteriology
An alternative cytoplasmic SFPQ isoform with reduced phase separation potential is up-regulated in ALS
Jacob Neeves, Marija Petrić, Oliver Jonathan Ziff, Beth Callaghan, Daniel Jutzi, Koustav Pal, Theodoros I. Roumeliotis, Jyoti Sharma Choudhary, Adrian M. Isaacs, Frank Rigo et al. · 2025 · Science Advances
UFMylation System: Biological Functions, Molecular Mechanisms, Diseases, and Drug Discovery
Huiyan Li, Fei Meng, Junjie Liang, Yijie Wang, Changliang Shan, Yan Chen · 2025 · MedComm
Kinetic proteomics identifies targeted changes in liver metabolism and the ribo-interactome by dietary sulfur amino acid restriction
William O. Jonsson, Agnieszka Borowik, Atul Pranay, Michael T Kinter, Emily T. Mirek, Jordan L. Levy, Elizabeth M. Snyder, Benjamin F. Miller, Tracy Gautsch Anthony · 2023 · GeroScience
Translational machinery and translation regulation in axon regeneration
Homaira Nawabi, Stéphane Belin · 2024 · Neural Regeneration Research
The evolving role of ribosomes in the regulation of protein synthesis
Karolina Gościńska, Ulrike Topf · 2020 · Acta Biochimica Polonica
eIF3d specialized translation requires a RACK1-driven eIF3d binding to 43S PIC in proliferating SH-SY5Y neuroblastoma cells
Federica Silvestri, Raffaele Montuoro, Elisabetta Catalani, Francesca Tilesi, Daniela Willems, Nicla Romano, Sara Ricciardi, Davide Cervia, Marcello Ceci · 2024 · Cellular Signalling
UFMylation in tumorigenesis: Mechanistic insights and therapeutic opportunities
Bingtao Liu, Tiantian Yang, Jialin Zhang, Hongbin Li · 2025 · Cellular Signalling
Ribosomal protein paralogues in ribosome specialization
Ivan Milenkovic, Eva Maria Novoa · 2025 · Philosophical Transactions of the Royal Society B Biological Sciences
Understanding GEMIN5 Interactions: From Structural and Functional Insights to Selective Translation
Encarnación Martı́nez-Salas, Salvador Abellan, Rosario Francisco‐Velilla · 2025 · Wiley Interdisciplinary Reviews - RNA
TblncRNA-23, a long non-coding RNA transcribed by RNA polymerase I, regulates developmental changes in Trypanosoma brucei
Beathrice Galili, K. Shanmugha Rajan, Yuval Ida Ashkenazi, Almog Freedman, Tirza Doniger, Smadar Cohen‐Chalamish, Hiba Waldman Ben‐Asher, Ron Unger, Isabel J. Roditi, Christian Tschudi et al. · 2025 · Nature Communications
Altered ribosomal profile in acquired resistance and reversal associates with pathological response to chemotherapy in inflammatory breast cancer
Gayathri R. Devi, Pritha PAI, Seayoung Lee, Matthew W. Foster, Dorababu S. Sannareddy, François Bertucci, Naoto Tada Ueno, Steven Van Laere · 2024 · npj Breast Cancer
Intricacies in the cross talk between metabolic enzymes, RNA, and protein translation
Yuan Lv, Muqddas Tariq, Xiangpeng Guo, Shahzina Kanwal, Miguel Angel Esteban · 2019 · Journal of Molecular Cell Biology
Transcriptome Analyses Show Changes in Gene Expression Triggered by a 31-bp InDel within OsSUT3 5′UTR in Rice Panicle
Qiuping Li, Chunlong Zhang, Jiancheng Wen, Lijuan Chen, Yitong Shi, Qinghui Yang, Dandan Li · 2023 · International Journal of Molecular Sciences
A specialized mRNA translation circuit instated in pluripotency presets the competence for cardiogenesis in humans
Deniz Bartsch, Kaustubh Kalamkar, Gaurav Ahuja, Jan‐Wilm Lackmann, Hisham Bazzi, Massimiliano Clamer, Sasha Mendjan, Argyris Papantonis, Leo Kurian · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
Mapping cryptic phosphorylation sites in the human proteome
Gasparotto, Dino, Zanon, Annarita, Bonaldo, Valerio, Marchiori, Elisa, Casagranda, Massimo, Di Domenico, Erika, Copat, Laura, Asquini, Tommaso Fortunato, Rigoli, Marta, Feltrin, Sirio Vittorio et al. · 2025 · The EMBO Journal
EMG1 methyltransferase activity affects ribosome occupancy at KSHV uORFs
Elena M. Harrington, James C. Murphy, Katherine L. Harper, Connor Hayward, Timothy J. Mottram, Julie L. Aspden, Adrian Whitehouse · 2025 · Cell Reports
Ribosomal expansion segment contributes to translation fidelity via N-terminal processing of ribosomal proteins
Riku Nagai, Olivia L Milam, Tatsuya Niwa, William Howell, Jacob A. Best, Hideji Yoshida, Carver D Freeburg, John M. Koomen, Kotaro Fujii · 2025 · Nucleic Acids Research
Respiratory syncytial virus (RSV) enhances translation of virus-resembling AU-rich host transcripts
Kyra Kerkhofs, Nicholas R. Guydosh, Mark A. Bayfield · 2025 · Virology Journal
Ribosomal modifications are associated with mesenchymal fate selection in the neural crest lineage
Irina V. Poverennaya, А. Р. Муртазина, Lei Li, Lorena Maili, Lukáš Sourada, Luis Fernando Montano-Gutierrez, Rozalina Galimullina, Tobias Steinschaden, Markéta Tesařová, Tomáš Zikmund et al. · 2026 · Nature Communications
Mapping the architecture of protein complexes in Arabidopsis using cross-linking mass spectrometry
Cao Son Trinh, Ruben Shrestha, Peng-Zhi Mao, W. C. Conner, Andres V. Reyes, Sumudu S. Karunadasa, An-Nie Yu, Grace Liu, Ken Hu, Shou-Ling Xu · 2025 · bioRxiv
Exploitation of the ribosomal protein L10 R98S mutation to enhance recombinant protein production in mammalian cells
Benno Verbelen, Tiziana Girardi, Sergey O. Sulima, Stijn Vereecke, Paulien Verstraete, Jelle Verbeeck, Jonathan Royaert, Sonia Cinque, Lorenzo Montanaro, Marianna Penzo et al. · 2022 · Engineering in Life Sciences
Nucleolar control by a non‐apoptotic p53‐caspases‐deubiquitinylase axis promotes resistance to bacterial infection
Po‐Hsiang Chen, Yi‐Tung Chen, Tai‐Ying Chu, Tian‐Hsiang Ma, Mei-Hsuan Wu, Hsi‐Hsien Lin, Yu‐Sun Chang, Bertrand Chin‐Ming Tan, Szecheng J. Lo · 2019 · The FASEB Journal
Development, validation, and application of the ribosome separation and reconstitution system for protein translation in vitro
Brandon M. Trainor, Dimitri G. Pestov, Natalia Shcherbik · 2021 · RNA
DUSP3 modulates IRES‐dependent translation of mRNAs through dephosphorylation of the HNRNPC protein in cells under genotoxic stimulus
Pault Y. M. Ferruzo, Viktor Kalbermatter Boell, Lilian C. Russo, Carla Columbano Oliveira, Fábio Luís Forti · 2024 · Biology of the Cell
GEMIN5 and neurodevelopmental diseases: From functional insights to disease perception
Encarnación Martı́nez-Salas, Rosario Francisco‐Velilla · 2025 · Neural Regeneration Research
The Use of B-Cell Polysome Profiling to Validate Novel RPL5 (uL18) and RPL26 (uL24) Variants in Diamond-Blackfan Anemia
Alexander V. Ludlow, Nicholas B George, Megan R. Glassford, Katie Udenberg, Mark Hannibal, Carla M. Schwalm, Katie Scott, Thomas L. Rothstein, Sharon A Singh · 2020 · Journal of Pediatric Hematology/Oncology
$${\text{COSNet}}_i$$: ComplexOme-Structural Network Interpreter used to study spatial enrichment in metazoan ribosomes
Federico Martínez-Seidel, Yin-Chen Hsieh, Dirk Walther, Joachim Kopka, Alexandre Augusto Pereira Firmino · 2021 · BMC Bioinformatics
Proteomic Profiling of Mouse Brain Pyruvate Kinase Binding Proteins: A Hint for Moonlighting Functions of PKM1?
О.А. Бунеева, Arthur Tigranovich Kopylov, Oksana V. Gnedenko, Марина Владимировна Медведева, Alexander V. Veselovsky, Alexis S. Ivanov, Victor Gavrilovich Zgoda, A. E. Medvedev · 2023 · International Journal of Molecular Sciences