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Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life
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“that have been found to be highly transmitted from mother to child in several studies10,15,16,17,41 and that are also present but not shared in pairs from non-westernized populations (Figure 2C).”
From Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population (2023) · cites this paper as [10]
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“While Escherichia coli and Bifidobacterium spp. are the most shared within the European pairs, as previously described,10,15,16,17,41”
From Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population (2023) · cites this paper as [10]
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“9 Furthermore, their gut microbiota exhibits decreased stability, potentially attributed to a higher abundance of pathogenic micro-organisms like Enterococcus and Klebsiella spp ., which may contribute to the depletion of Bacteroidaceae .”
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“For each sequence’s alignment result, the best BLAST hit (one high-scoring segment pair > 60 bits) was used for subsequent analysis [33, 40, 54].”
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“Infants’ gut microbiota diversifies immediately following the introduction of 342 complementary foods, mirroring the diversification in the food substrates provided (48-53), 343 and continues to mature until around 2 to 3 years of age when it becomes adult-like (54).”
BackgroundInfluentialGlycan profiling of the gut microbiota by Glycan-seq
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BackgroundGut Microbiome in Health and Disease
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Potential Elimination of Human Gut Resistome by Exploiting the Benefits of Functional Foods
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“2017) are remarkably similar; the change of intestinal microbiota in animal development is an ongoing succession process (Backhed et al. 2015).”
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“Nonetheless, increased α -diversity may offer a benefit in promoting the health of the host later in life when the diet is more diverse (45).”
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Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population
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The influence of the gastrointestinal microbiome on infant colic
Chaib, A. O., Levy, E. I., Chaib, M. O., & Vandenplas, Y. (2020) · Expert Review of Gastroenterology & Hepatology · doi:10.1080/17474124.2020.1791702 · Cited by 23
Nutricionist, A. C. T., Procianoy, R. S., Roesch, L. F. W., Corso, A. L., Dobbler, P. T., & Silveira, R. C. (2020) · PLoS ONE · doi:10.1371/journal.pone.0238632 · Cited by 23
“Taken together, neurological immaturity and a dysbiotic and immature gut, both associated with prematurity may disrupt the bidirectional communication between the nervous system and enteric cells, leading to altered signaling and neurological development, and also altered immune responses [3, 44, 45].”
BackgroundMicrobiota Gut–Brain Axis and Autism Spectrum Disorder: Mechanisms and Therapeutic Perspectives
Petropoulos, A., Stavropoulou, E., Tsigalou, C., & Bezirtzoglou, E. (2025) · Nutrients · doi:10.3390/nu17182984 · Cited by 35
“…significantly influences an infant’s initial microbial colonization; vaginal birth exposes the newborn to maternal vaginal and gut flora, such as Lactobacillus , whereas cesarean section results in colonization by skin and environmental microbes, often with lower initial microbial diversity [30].”
Microbial influences on gut development and gut-brain communication
Ye, L., & Rawls, J. F. (2021) · Development · doi:10.1242/dev.194936 · Cited by 22
He, Y., Zhang, Y., Li, F., & Shi, Y. (2022) · Frontiers in Neuroscience · doi:10.3389/fnins.2022.849372 · Cited by 21
The Role of Early Life Microbiota Composition in the Development of Allergic Diseases
Tuniyazi, M., Li, S., Hu, X., Fu, Y., & Zhang, N. (2022) · Microorganisms · doi:10.3390/microorganisms10061190 · Cited by 23
Jiang, B., Qin, C., Xu, Y., Song, X., Fu, Y., Li, R., Liu, Q., & Shi, D. (2024) · Frontiers in Microbiology · doi:10.3389/fmicb.2024.1301292 · Cited by 29
“Result filtering: For each sequence, the result with the highest score (one HSP > 60 bits) is selected for subsequent analysis (Qin et al., 2012, 2014; Li et al., 2014; Backhed et al., 2015).”
Breastfeeding and cardiometabolic markers at age 12: a population-based birth cohort study
Pluymen, L. P. M., Wijga, A. H., Gehring, U., Koppelman, G. H., Smit, H. A., & van Rossem, L. (2019) · International Journal of Obesity · doi:10.1038/s41366-018-0317-5 · Cited by 22
Prince, A., Pace, R. M., Dean, T. A., Takahashi, D. L., Kievit, P., Friedman, J. E., & Aagaard, K. M. (2019) · American Journal of Primatology · doi:10.1002/ajp.22980 · Cited by 22
The Capacity of the Fecal Microbiota From Malawian Infants to Ferment Resistant Starch
Wang, Y., Mortimer, E. K., Katundu, K., et al. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.01459 · Cited by 21
Early Gut Fungal and Bacterial Microbiota and Childhood Growth
Schei, K., Simpson, M. R., Avershina, E., Rudi, K., Øien, T., Júlíusson, P. B., Underhill, D. M., Salamati, S., & Ødegård, R. A. (2020) · Frontiers in Pediatrics · doi:10.3389/fped.2020.572538 · Cited by 21
Development of gut microbiota along with its metabolites of preschool children
Xiong, J., Hu, H., Xu, C., Yin, J., Liu, M., Zhang, L., Duan, Y., & Huang, Y. (2022) · BMC Pediatrics · doi:10.1186/s12887-021-03099-9 · Cited by 25
Strain tracking in complex microbiomes using synteny analysis reveals per-species modes of evolution
Enav, H., Paz, I., & Ley, R. E. (2024) · Nature Biotechnology · doi:10.1038/s41587-024-02276-2 · Cited by 24
“We then applied the APSS thresholds to a separate dataset to identify strain sharing between mothers and infants 32 .”
Todor, S. B., & Ichim, C. (2025) · Children · doi:10.3390/children12020166 · Cited by 22
“These findings suggest a significant disruption in normal gut microbiome maturation compared to healthy children [15].”
Metadata
- Authors
- Bäckhed, F., Roswall, J., Peng, Y., Feng, Q., Jia, H., Kovatcheva-Datchary, P., Li, Y., Xia, Y., Xie, H., Zhong, H., Khan, M. T., Zhang, J., Li, J., Xiao, L., Al-Aama, J., Zhang, D., Lee, Y. S., Kotowska, D., Colding, C., Tremaroli, V., Yin, Y., Bergman, S., Xu, X., Madsen, L., Kristiansen, K., Dahlgren, J., & Wang, J.
- Corresponding author
- Bäckhed, Fredrik
- Dahlgren, Jovanna
- Wang, Jun
- ORCID
- Venue
- Cell Host & Microbe
- Publisher
- Elsevier BV
- Published
- 2015-06
- Volume
- 17
- Issue
- 6
- Pages
- 852
- ISSN
- 1931-3128 (ISSN-L)
- OpenAlex
- W4231110705
- Cited by
- 738
- References
- 0
- Citations by year
- 2026: 36 · 2025: 54 · 2024: 51 · 2023: 70 · 2022: 69 · 2021: 112 · 2020: 122 · 2019: 81 · 2018: 55 · 2017: 43 · 2016: 40 · 2015: 4
- FWCI
- 20.56
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell Host & Microbe (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Nursing › Nutrition and Dietetics › Infant Nutrition and Health
- Life Sciences › Agricultural and Biological Sciences › Food Science › Probiotics and Fermented Foods
- Keywords
- gut microbiota, infant gut microbiota, breastfeeding, weaning, maternal microbiota
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