Enabling Precision Medicine With Digital Case Classification at the Point-of-Care
Open accessAbstract
Infectious and inflammatory diseases of the central nervous system are difficult to identify early. Case definitions for aseptic meningitis, encephalitis, myelitis, and acute disseminated encephalomyelitis (ADEM) are available, but rarely put to use. The VACC-Tool (Vienna Vaccine Safety Initiative Automated Case Classification-Tool) is a mobile application enabling immediate case ascertainment based on consensus criteria at the point-of-care. The VACC-Tool was validated in a quality management program in collaboration with the Robert-Koch-Institute. Results were compared to ICD-10 coding and retrospective analysis of electronic health records using the same case criteria. Of 68,921 patients attending the emergency room in 10/2010-06/2013, 11,575 were hospitalized, with 521 eligible patients (mean age: 7.6 years) entering the quality management program. Using the VACC-Tool at the point-of-care, 180/521 cases were classified successfully and 194/521 ruled out with certainty. Of the 180 confirmed cases, 116 had been missed by ICD-10 coding, 38 misclassified. By retrospective application of the same case criteria, 33 cases were missed. Encephalitis and ADEM cases were most likely missed or misclassified. The VACC-Tool enables physicians to ask the right questions at the right time, thereby classifying cases consistently and accurately, facilitating translational research. Future applications will alert physicians when additional diagnostic procedures are required.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In tests with absence of a gold standard assay, PPA, NPA, and ORA are recommended in place of sensitivity, specificity, and %accuracy.
“However, in tests with absence of a gold standard assay, the terms positive percent agreement (PPA), negative percent agreement (NPA), and overall rate of agreement (ORA) were recommended in place of sensitivity, specificity, and %accuracy, respectively.”
From Comparison of different algorithms for lupus anticoagulant detection: a single-center experience (2024) · cites this paper as [22]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
No references could be resolved yet.
Research works printed but not linked: 27
- Al-Tawfiq J.A. Zumla A. Gautret P. Surveillance for emerging respiratory viruses Lancet Infect. Dis. 14 10 2014 992 1000 25189347 PMC7106459
- Baker M.A. Kaelber D.C. Bar-Shain D.S. Advanced clinical decision support for vaccine adverse event detection and reporting Clin. Infect. Dis 2015 PMC6642796 26060294
- Dal Pan G.J. Commentary on “secondary use of electronic health record data: spontaneous triggered adverse drug event reporting” by Linder et al. Pharmacoepidemiol. Drug Saf. 19 12 2010 1216 1217 20981885
- Dale R.C. Acute disseminated encephalomyelitis Semin. Pediatr. Infect. Dis. 14 2 2003 90 95 12881796
- Duffy D.J. Problems, challenges and promises: perspectives on precision medicine Brief. Bioinform 2015 26249224
- Granerod J. Ambrose H.E. Davies N.W. Causes of encephalitis and differences in their clinical presentations in England: a multicentre, population-based prospective study Lancet Infect. Dis. 10 12 2010 835 844 20952256
- Gundlapalli A.V. Tang H. Tonnierre C. Validity of electronic medical record-based rules for the early detection of meningitis and encephalitis AMIA Annu Symp Proc 2007 299 303 PMC2655809 18693846
- Horwitz R.I. Yu E.C. Assessing the reliability of epidemiologic data obtained from medical records J. Chronic Dis. 37 11 1984 825 831 6542107
- Hughes P.S. Jackson A.C. Delays in initiation of acyclovir therapy in herpes simplex encephalitis Can. J. Neurol. Sci. 39 5 2012 644 648 22931707
- Jaffe S. Planning for US precision medicine initiative underway Lancet 385 9986 2015 2448 2449 26122056
- Karsch K. Obermeier P. Seeber L. Human parechovirus infections associated with seizures and rash in infants and toddlers Pediatr. Infect. Dis. J 2015 26181895
- Kelly T.A. O'Lorcain P. Moran J. Underreporting of viral encephalitis and viral meningitis, Ireland, 2005–2008 Emerg. Infect. Dis. 19 9 2013 1428 1436 23965781 PMC3810922
- Koelman D.L. Mateen F.J. Acute disseminated encephalomyelitis: current controversies in diagnosis and outcome J. Neurol 2015 25761377
- Lankinen K.S. Pastila S. Kilpi T. Nohynek H. Makela P.H. Olin P. Vaccinovigilance in Europe—–need for timeliness, standardization and resources Bull. World Health Organ. 82 11 2004 828 835 15640918 PMC2623063
- Lin C.T. Albertson G.A. Schilling L.M. Is patients' perception of time spent with the physician a determinant of ambulatory patient satisfaction? Arch. Intern. Med. 161 11 2001 1437 1442 11386893
- Linder J.A. Haas J.S. Iyer A. Secondary use of electronic health record data: spontaneous triggered adverse drug event reporting Pharmacoepidemiol. Drug Saf. 19 12 2010 1211 1215 21155192
- Muehlhans S. Richard G. Ali M. Safety reporting in developing country vaccine clinical trials—a systematic review Vaccine 30 22 2012 3255 3265 22406279
- Oubari H. Tuttle R. Rath B. Bravo L. Communicating vaccine safety to the media and general public Curr. Drug Saf. 10 1 2015 80 86 25859680
- Prins H. Kruisinga F.H. Buller H.A. Zwetsloot-Schonk J.H. Availability and usability of data for medical practice assessment Int. J. Qual. Health Care 14 2 2002 127 137 11954682
- Rath B. Magnus M. Heininger U. Evaluating the Brighton Collaboration case definitions, aseptic meningitis, encephalitis, myelitis, and acute disseminated encephalomyelitis, by systematic analysis of 255 clinical cases Vaccine 28 19 2010 3488 3495 20197145
- Seeber L. Michl B. Rundblad G. A Design Thinking Approach to Effective Vaccine Safety Communication Curr. Drug Saf. 10 1 2015 31 40 25859673
- Sejvar J.J. Kohl K.S. Bilynsky R. Encephalitis, myelitis, and acute disseminated encephalomyelitis (ADEM): case definitions and guidelines for collection, analysis, and presentation of immunization safety data Vaccine 25 31 2007 5771 5792 17570566
- Souza T. Kush R. Evans J.P. Global clinical data interchange standards are here! Drug Discov. Today 12 3–4 2007 174 181 17275739
- St Germaine-Smith C. Metcalfe A. Pringsheim T. Recommendations for optimal ICD codes to study neurologic conditions: a systematic review Neurology 79 10 2012 1049 1055 22914826 PMC3430709
- Tapiainen T. Prevots R. Izurieta H.S. Aseptic meningitis: case definition and guidelines for collection, analysis and presentation of immunization safety data Vaccine 25 31 2007 5793 5802 17574313
- Zander A. Britton P.N. Navin T. Horsley E. Tobin S. McAnulty J.M. An outbreak of enterovirus 71 in metropolitan Sydney: enhanced surveillance and lessons learnt Med. J. Aust. 201 11 2014 663 666 25495312
- Zwaan L. de Bruijne M. Wagner C. Patient record review of the incidence, consequences, and causes of diagnostic adverse events Arch. Intern. Med. 170 12 2010 1015 1021 20585065
Cited by
Sorted by citations
Comparison of different algorithms for lupus anticoagulant detection: a single-center experience
Apipongrat, D., Lamool, R., Arnutti, P., Ruangpratheep, C., & Chantkran, W. (2024) · Research and Practice in Thrombosis and Haemostasis · doi:10.1016/j.rpth.2024.102333 · Cited by 4 · see citing works
- Authors
- Obermeier, P., Muehlhans, S., Hoppe, C., Karsch, K., Tief, F., Seeber, L., Chen, X., Conrad, T., Boettcher, S., Diedrich, S., & Rath, B.
- Affiliations
- Vienna Vaccine Safety Initiative (DE)
- Charité – Universitätsmedizin Berlin (DE)
- Freie Universität Berlin (DE)
- Robert Koch Institute (DE)
- Corresponding author
- Rath, Barbara
- Venue
- EBioMedicine
- Publisher
- Elsevier BV
- Published
- 2016-02
- Volume
- 4
- Pages
- 191-196
- ISSN
- 2352-3964 (ISSN-L)
- PMC
- PMC4776059
- OpenAlex
- W2232775164
- Cited by
- 29
- References
- 0
- Citations by year
- 2025: 2 · 2024: 3 · 2023: 1 · 2022: 5 · 2021: 8 · 2020: 2 · 2019: 3 · 2018: 1 · 2017: 2 · 2016: 2
- FWCI
- 2.18
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- EBioMedicine (publishedVersion, cc-by-nc-nd)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Publication server of the Robert Koch Institute (Robert Kock Institute) (submittedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Topics
- Life Sciences › Pharmacology, Toxicology and Pharmaceutics › Toxicology › Pharmacovigilance and Adverse Drug Reactions
- Health Sciences › Health Professions › Health Information Management › Medical Coding and Health Information
- Health Sciences › Medicine › Infectious Diseases › Infectious Encephalopathies and Encephalitis
- Keywords
- point-of-care diagnosis, central nervous system infection, aseptic meningitis, encephalitis, myelitis, acute disseminated encephalomyelitis, ICD-10 coding, electronic health records, quality management programs, mobile application, case ascertainment, precision medicine
- MeSH terms
- Humans, Medical Records, Software, Medical Records Systems, Computerized, Point-of-Care Systems, Precision Medicine
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review