Cited by 29Pharmacovigilance and Adverse Drug ReactionsMedical Coding and Health InformationInfectious Encephalopathies and Encephalitis

Enabling Precision Medicine With Digital Case Classification at the Point-of-Care

Open access
Obermeier, Patrick, Muehlhans, Susann, Hoppe, Christian, Karsch, Katharina, Tief, Franziska, Seeber, Lea, Chen, Xi, Conrad, Tim +3 more·2016·EBioMedicine

Abstract

Infectious and inflammatory diseases of the central nervous system are difficult to identify early. Case definitions for aseptic meningitis, encephalitis, myelitis, and acute disseminated encephalomyelitis (ADEM) are available, but rarely put to use. The VACC-Tool (Vienna Vaccine Safety Initiative Automated Case Classification-Tool) is a mobile application enabling immediate case ascertainment based on consensus criteria at the point-of-care. The VACC-Tool was validated in a quality management program in collaboration with the Robert-Koch-Institute. Results were compared to ICD-10 coding and retrospective analysis of electronic health records using the same case criteria. Of 68,921 patients attending the emergency room in 10/2010-06/2013, 11,575 were hospitalized, with 521 eligible patients (mean age: 7.6 years) entering the quality management program. Using the VACC-Tool at the point-of-care, 180/521 cases were classified successfully and 194/521 ruled out with certainty. Of the 180 confirmed cases, 116 had been missed by ICD-10 coding, 38 misclassified. By retrospective application of the same case criteria, 33 cases were missed. Encephalitis and ADEM cases were most likely missed or misclassified. The VACC-Tool enables physicians to ask the right questions at the right time, thereby classifying cases consistently and accurately, facilitating translational research. Future applications will alert physicians when additional diagnostic procedures are required.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/j.ebiom.2016.01.008

Cites

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • In tests with absence of a gold standard assay, PPA, NPA, and ORA are recommended in place of sensitivity, specificity, and %accuracy.

    “However, in tests with absence of a gold standard assay, the terms positive percent agreement (PPA), negative percent agreement (NPA), and overall rate of agreement (ORA) were recommended in place of sensitivity, specificity, and %accuracy, respectively.”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

No references could be resolved yet.

Research works printed but not linked: 27

  1. Al-Tawfiq J.A. Zumla A. Gautret P. Surveillance for emerging respiratory viruses Lancet Infect. Dis. 14 10 2014 992 1000 25189347 PMC7106459
  2. Baker M.A. Kaelber D.C. Bar-Shain D.S. Advanced clinical decision support for vaccine adverse event detection and reporting Clin. Infect. Dis 2015 PMC6642796 26060294
  3. Dal Pan G.J. Commentary on “secondary use of electronic health record data: spontaneous triggered adverse drug event reporting” by Linder et al. Pharmacoepidemiol. Drug Saf. 19 12 2010 1216 1217 20981885
  4. Dale R.C. Acute disseminated encephalomyelitis Semin. Pediatr. Infect. Dis. 14 2 2003 90 95 12881796
  5. Duffy D.J. Problems, challenges and promises: perspectives on precision medicine Brief. Bioinform 2015 26249224
  6. Granerod J. Ambrose H.E. Davies N.W. Causes of encephalitis and differences in their clinical presentations in England: a multicentre, population-based prospective study Lancet Infect. Dis. 10 12 2010 835 844 20952256
  7. Gundlapalli A.V. Tang H. Tonnierre C. Validity of electronic medical record-based rules for the early detection of meningitis and encephalitis AMIA Annu Symp Proc 2007 299 303 PMC2655809 18693846
  8. Horwitz R.I. Yu E.C. Assessing the reliability of epidemiologic data obtained from medical records J. Chronic Dis. 37 11 1984 825 831 6542107
  9. Hughes P.S. Jackson A.C. Delays in initiation of acyclovir therapy in herpes simplex encephalitis Can. J. Neurol. Sci. 39 5 2012 644 648 22931707
  10. Jaffe S. Planning for US precision medicine initiative underway Lancet 385 9986 2015 2448 2449 26122056
  11. Karsch K. Obermeier P. Seeber L. Human parechovirus infections associated with seizures and rash in infants and toddlers Pediatr. Infect. Dis. J 2015 26181895
  12. Kelly T.A. O'Lorcain P. Moran J. Underreporting of viral encephalitis and viral meningitis, Ireland, 2005–2008 Emerg. Infect. Dis. 19 9 2013 1428 1436 23965781 PMC3810922
  13. Koelman D.L. Mateen F.J. Acute disseminated encephalomyelitis: current controversies in diagnosis and outcome J. Neurol 2015 25761377
  14. Lankinen K.S. Pastila S. Kilpi T. Nohynek H. Makela P.H. Olin P. Vaccinovigilance in Europe—–need for timeliness, standardization and resources Bull. World Health Organ. 82 11 2004 828 835 15640918 PMC2623063
  15. Lin C.T. Albertson G.A. Schilling L.M. Is patients' perception of time spent with the physician a determinant of ambulatory patient satisfaction? Arch. Intern. Med. 161 11 2001 1437 1442 11386893
  16. Linder J.A. Haas J.S. Iyer A. Secondary use of electronic health record data: spontaneous triggered adverse drug event reporting Pharmacoepidemiol. Drug Saf. 19 12 2010 1211 1215 21155192
  17. Muehlhans S. Richard G. Ali M. Safety reporting in developing country vaccine clinical trials—a systematic review Vaccine 30 22 2012 3255 3265 22406279
  18. Oubari H. Tuttle R. Rath B. Bravo L. Communicating vaccine safety to the media and general public Curr. Drug Saf. 10 1 2015 80 86 25859680
  19. Prins H. Kruisinga F.H. Buller H.A. Zwetsloot-Schonk J.H. Availability and usability of data for medical practice assessment Int. J. Qual. Health Care 14 2 2002 127 137 11954682
  20. Rath B. Magnus M. Heininger U. Evaluating the Brighton Collaboration case definitions, aseptic meningitis, encephalitis, myelitis, and acute disseminated encephalomyelitis, by systematic analysis of 255 clinical cases Vaccine 28 19 2010 3488 3495 20197145
  21. Seeber L. Michl B. Rundblad G. A Design Thinking Approach to Effective Vaccine Safety Communication Curr. Drug Saf. 10 1 2015 31 40 25859673
  22. Sejvar J.J. Kohl K.S. Bilynsky R. Encephalitis, myelitis, and acute disseminated encephalomyelitis (ADEM): case definitions and guidelines for collection, analysis, and presentation of immunization safety data Vaccine 25 31 2007 5771 5792 17570566
  23. Souza T. Kush R. Evans J.P. Global clinical data interchange standards are here! Drug Discov. Today 12 3–4 2007 174 181 17275739
  24. St Germaine-Smith C. Metcalfe A. Pringsheim T. Recommendations for optimal ICD codes to study neurologic conditions: a systematic review Neurology 79 10 2012 1049 1055 22914826 PMC3430709
  25. Tapiainen T. Prevots R. Izurieta H.S. Aseptic meningitis: case definition and guidelines for collection, analysis and presentation of immunization safety data Vaccine 25 31 2007 5793 5802 17574313
  26. Zander A. Britton P.N. Navin T. Horsley E. Tobin S. McAnulty J.M. An outbreak of enterovirus 71 in metropolitan Sydney: enhanced surveillance and lessons learnt Med. J. Aust. 201 11 2014 663 666 25495312
  27. Zwaan L. de Bruijne M. Wagner C. Patient record review of the incidence, consequences, and causes of diagnostic adverse events Arch. Intern. Med. 170 12 2010 1015 1021 20585065

Cited by

Sorted by citations

Authors
Obermeier, P., Muehlhans, S., Hoppe, C., Karsch, K., Tief, F., Seeber, L., Chen, X., Conrad, T., Boettcher, S., Diedrich, S., & Rath, B.
Affiliations
  • Vienna Vaccine Safety Initiative (DE)
  • Charité – Universitätsmedizin Berlin (DE)
  • Freie Universität Berlin (DE)
  • Robert Koch Institute (DE)
Corresponding author
Rath, Barbara
Venue
EBioMedicine
Publisher
Elsevier BV
Published
2016-02
Volume
4
Pages
191-196
ISSN
2352-3964 (ISSN-L)
OpenAlex
W2232775164
Cited by
29
References
0
Citations by year
2025: 2 · 2024: 3 · 2023: 1 · 2022: 5 · 2021: 8 · 2020: 2 · 2019: 3 · 2018: 1 · 2017: 2 · 2016: 2
FWCI
2.18
Type
journal article
Language
en
Open access
Locations
  • EBioMedicine (publishedVersion, cc-by-nc-nd)
  • PubMed Central (publishedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • Publication server of the Robert Koch Institute (Robert Kock Institute) (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Topics
  • Life Sciences › Pharmacology, Toxicology and Pharmaceutics › Toxicology › Pharmacovigilance and Adverse Drug Reactions
  • Health Sciences › Health Professions › Health Information Management › Medical Coding and Health Information
  • Health Sciences › Medicine › Infectious Diseases › Infectious Encephalopathies and Encephalitis
Keywords
point-of-care diagnosis, central nervous system infection, aseptic meningitis, encephalitis, myelitis, acute disseminated encephalomyelitis, ICD-10 coding, electronic health records, quality management programs, mobile application, case ascertainment, precision medicine
MeSH terms
Humans, Medical Records, Software, Medical Records Systems, Computerized, Point-of-Care Systems, Precision Medicine

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review